| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4054 |
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| Symbol | |
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| ID | 6179693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1078362 |
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| End bp | 1079255 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641683824 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001810735 |
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| Protein GI | 172063084 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.181968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGA CTGTCCAGCC CGCGGCGCCG GCCGCATCGA ACGCGGTCCG CACGCCGTGG
CACGAATTCT GGCGCAAGTT CCGCAAGCAG ACCGTCGCGC TCGTCGCGGG CGGTTTCGTG
CTCGCGCTCG TCGTGCTGGC GTTCGTCGGC CCGCACATCG CGCCGTTCGA TCCGGAAAAC
TATTTCGACT ACGACGCGCT GAACGCGGGG CCGTCGGCCG TGCACTGGTT CGGCGTCGAT
TCGCTCGGCC GCGACATCTT CAGCCGGATC ATCACCGGCA CGCGCATCTC GCTCGCGGCC
GGCTTTTTCT CGGTCGCGCT CGGCGCGCTC ATCGGGACGT TCTTCGGGCT GCTCGCCGGC
TACTACGAAG GCTGGTGGGA CCGCATCACG ATGCGCGTGG CCGACGTGCT GTTCGCGTTC
CCGGGGATCC TGCTCGCGAT CGGCGTGGTC GCGATCCTCG GCAACGGGAT GGTCAACGTG
ATCTGCGCGG TCGCGATCTT CAGCATTCCG GCGTTCGCGC GGCTCGTGCG CGGCAACACG
CTGATGCTCA AGCACATGAC CTACGTGGAA GCCGCGCGCA GCATCGGCGC GTCCGACTGG
ACGATCATCA TGCGGCACAT CCTGCCGGGC ACCGTGTCGT CCGTCGTCGT CTACTTCACG
ATGCGGATCG GCACGTCGAT CATCACGGCG GCAAGCCTGT CGTTTCTCGG GCTCGGCGCG
CAGCCGCCGA CGCCGGAGTG GGGCGCGATG CTCAACGAGG CGCGCGCGGA CATGGTGAGC
GCACCGCACG TCGCGATCTT CCCGAGCCTG GCGATCTTCC TGACCGTGCT CGCGTTCAAC
CTGCTCGGCG ACGGGCTGCG CGACGCACTC GATCCGAAGC TGGAGCGCCG CTGA
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| Protein sequence | MNATVQPAAP AASNAVRTPW HEFWRKFRKQ TVALVAGGFV LALVVLAFVG PHIAPFDPEN
YFDYDALNAG PSAVHWFGVD SLGRDIFSRI ITGTRISLAA GFFSVALGAL IGTFFGLLAG
YYEGWWDRIT MRVADVLFAF PGILLAIGVV AILGNGMVNV ICAVAIFSIP AFARLVRGNT
LMLKHMTYVE AARSIGASDW TIIMRHILPG TVSSVVVYFT MRIGTSIITA ASLSFLGLGA
QPPTPEWGAM LNEARADMVS APHVAIFPSL AIFLTVLAFN LLGDGLRDAL DPKLERR
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