| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4053 |
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| Symbol | |
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| ID | 6179692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1077434 |
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| End bp | 1078354 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641683823 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001810734 |
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| Protein GI | 172063083 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.221048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAATT TTCTCGTCAA ACGCCTGTTC GGCCTGCTGC CCACGCTCGC GATCGTCGCG
GTGCTGGTGT TCCTGTTCGT GCACCTGCTG CCGGGCGACC CGGCGCGGCT CGCGGCGGGC
CCCGAAGCCG ACGACGCGAC GGTCGCGCTG GTGCGCGCCG ATCTCGGCCT CGACCGGCCG
CTGCCCGCGC AGTTCGCGAA CTTCTTCGTG AAGATCGCGC ACGGCGATTT CGGCACATCG
ACGCGCAGCA AGCGGCCGGT GTCGACGGAG ATCGGCGAGC GCTTCATGCC GACGCTGCTG
CTGACGCTCG TCAGCATGGT GTGGGCGACG GCGTTCGGGA TGGCGATCGG CATCGCGTCG
GCGGTGTGGC GCAACCGCTG GCCCGACCGC ATCGGGATGA CGATCGCGGT GTCGGGCATC
TCGTTTCCGG CGTTCGCGCT CGGCATGCTG CTGATGGAAA TCTTCTCGGT GAAGCTCGGC
TGGCTGCCCG TCGTGCCGGA CGGCACGTGG AAAAGCTACG TGCTGCCGTC GCTGACGCTC
GGCGCCGCGG TCGCGGCCGT GATGGCGCGC TTCACGCGCG CGTCGTTCGT CGAGGTGCTC
AACGAGGACT TCGTGCGCAC CGCGCGCGCG AAGGGCGTGC ACGAACCGAT GGTCGTGCTC
AAGCACTGCC TGCGCAACGC GATGATCCCG GTCGTCACGA TGATGGGGCT GCAGTTCGGC
TTCCTGCTCG GCGGCTCGAT CGTCGTCGAG GCCGTGTTCA ACTGGCCGGG GCTCGGGCGC
CTGCTGGTCG ACGCGGTGAC GATGCGCGAC TACCCGGTGA TCCAGGCGAT CGTGCTGCTG
TTCTCGCTGG AATTCATCCT GATCAACCTG ACCGTGGACG TGCTGTACGC GGTCATCAAC
CCGACCATCC GGTTCAAGTG A
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| Protein sequence | MLNFLVKRLF GLLPTLAIVA VLVFLFVHLL PGDPARLAAG PEADDATVAL VRADLGLDRP
LPAQFANFFV KIAHGDFGTS TRSKRPVSTE IGERFMPTLL LTLVSMVWAT AFGMAIGIAS
AVWRNRWPDR IGMTIAVSGI SFPAFALGML LMEIFSVKLG WLPVVPDGTW KSYVLPSLTL
GAAVAAVMAR FTRASFVEVL NEDFVRTARA KGVHEPMVVL KHCLRNAMIP VVTMMGLQFG
FLLGGSIVVE AVFNWPGLGR LLVDAVTMRD YPVIQAIVLL FSLEFILINL TVDVLYAVIN
PTIRFK
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