| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4052 |
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| Symbol | |
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| ID | 6180941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1075804 |
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| End bp | 1077366 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641683822 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001810733 |
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| Protein GI | 172063082 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.544759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGC CGCATTCGTT CCCGGTGTTC CGTCCACGCG CACTTTTCGC CGCGGGGGCA
GGCGCGCTCG CGCTGTCGGT CGCGGCACCC GCGTTCGCGC AACAGAACGT CGTGGTCGCC
GTGTACTCGA CGTTCACGAC GATGGACCCG TACGACGCGA ACGACACGGT GTCGCAAGCG
GTCGTCAAGT CGTTCTACGA AGGGCTGTTC GGCTTCGACA AGGACATGAA GCTCGTCAAC
GTGCTCGCGA CGGGCTATCA GGCGTCGCCC GATGCGAAGG TCTATACGGT CAAGCTGCGC
GACGGCGTGA AGTTCCAGGA CGGCACCGAC TTCAACGCCG CCGCGGTGAA GGCGAACTTC
GACCGCGTGA CCGATCCGGC GAACAAGCTG AAGCGTTACG GGCTGTTCCG CGTGATCGAG
AAGACCGAGG TGGTCGATCC GATGACGGTG AAGTTCACGC TGCGCGAGCC GTTCTCCGCG
TTCATCAACA CGCTCGCGCA CCCGTCGGCG GTGATGATTT CGCCGGCCGC GCTGAAGAAG
TGGGGGCGCG ACGTATCGCT GCATCCGGTC GGCACGGGCC CGTTCGAGTT CGTCGAATGG
AAGCAGACCG ACGACATGAA GGTGAAGAAG TTTGCGGGCT ACTGGAAGAA GGGCTATCCG
AAGGTCGATT CGATCGACTG GAAGCCGGTG GTCGACAACA ACACGCGCGC CGCGCTGCTC
AAGACCGGCG AGGCGGATTT CGCGTTCACG ATTCCGTTCG AGCAGGCCGC CGACCTGAAG
AGCAACCCGA AGGTCGAGCT GATCGAGCGG CCGTCGATCA TCCAGCGCTA CATCTCGCTG
AACACGCAGA AGAAGCCGTT CGACAATCCG AAGGTGCGTG AGGCGCTGAA CTACGCGGTC
AACAAGGAAG CGCTGGCGAA GGTCGTGTTC GCCGGCTATG CGACGCCGCA GACGGGAGTC
GCACCGATCG GCGTCGAATA CGCGACCAAG CTCGGGCCGT GGCCGTACGA TCCGGCGAAG
GCGCGCGCGT TGCTGAAGGA GGCCGGCTAT CCGAACGGCT TCGAATCGAC GCTCTGGTCC
GCGTACAACC ATTCGACGGC GCAGAAGCTG ATCCAGTTCG TGCAGCAGCA GCTCGCGCAG
GTCGGCGTGA AGGTGCAGGT GCAGGCGCTG GAAGCCGGCG AGCGGGTCGC GAAGGTCGAG
AGCGCGCAGG ATCCGGCCGC GGCGCCGGTG CGGATGTACT ACAGCGGCTG GTCGGCATCG
ACGGGCGAGG CGAACTGGGC GCTGTCGCCG CTGCTCGCGT CCACGTCGGC GCCGCCGAAG
CTCTACAACA CGGCGTACTA CAAGAACAGT GCGGTCGACG ATGCGCTCGC GAAGGCGCTC
GAGACGACCG ACCGTGCGAA GAAGGCCGCC CTGTACGCCG ACGCGCAGAA GCAGGTGTGG
GCCGACGCGC CGTGGATTTT CCTGGTGCAG GAGAAGATCG TTTATGCGCG TAACAAGCGC
CTGCACGGCA TGTACGTCAT GCCGGACGGT TCGTTCAACT TCGACGAAAT CTCGGTGAAA
TGA
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| Protein sequence | MNKPHSFPVF RPRALFAAGA GALALSVAAP AFAQQNVVVA VYSTFTTMDP YDANDTVSQA
VVKSFYEGLF GFDKDMKLVN VLATGYQASP DAKVYTVKLR DGVKFQDGTD FNAAAVKANF
DRVTDPANKL KRYGLFRVIE KTEVVDPMTV KFTLREPFSA FINTLAHPSA VMISPAALKK
WGRDVSLHPV GTGPFEFVEW KQTDDMKVKK FAGYWKKGYP KVDSIDWKPV VDNNTRAALL
KTGEADFAFT IPFEQAADLK SNPKVELIER PSIIQRYISL NTQKKPFDNP KVREALNYAV
NKEALAKVVF AGYATPQTGV APIGVEYATK LGPWPYDPAK ARALLKEAGY PNGFESTLWS
AYNHSTAQKL IQFVQQQLAQ VGVKVQVQAL EAGERVAKVE SAQDPAAAPV RMYYSGWSAS
TGEANWALSP LLASTSAPPK LYNTAYYKNS AVDDALAKAL ETTDRAKKAA LYADAQKQVW
ADAPWIFLVQ EKIVYARNKR LHGMYVMPDG SFNFDEISVK
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