Gene BamMC406_4029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4029 
Symbol 
ID6180287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1047985 
End bp1049577 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content72% 
IMG OID641683799 
Productaldehyde dehydrogenase 
Protein accessionYP_001810710 
Protein GI172063059 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.123507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.390513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTCA CAGGTCAGCT CCTGATCGGC CAGTCGACCA TCGCCGGACA GAACGGCACC 
CTCCACGCGA TCGCCGCCGC CACCGGCGAA CCGCTCGACC CCGCGTTCGG CGGCGCGAGC
CTGCACGACC TGGAGACGGC CTGCGCGCTC GCCGACGACG CGTTCGATAC GTACCGCGAA
ACGAGTCCCG AGCAACGCGC GGCGTTTCTC GACGCGATCG GCCGCAACAT CATGGCGCTC
GGCGACGACC TGATCGAGCG CTGCGTCACC GAAACGGGCC TGCCGCGCGC ACGCATCGAA
GGCGAACGCG GCCGCACGGT CGGCCAGCTC GCGCTGTTCG CGTCGCTCGT ACGCGACGGC
GGTTACGTCG ACGCGCGCAT CGACCCGGCC CGGCCGGACC GCAAGCCGCT ACCGCGGGTC
GACCTGCGCC TGCGCAACAT CGCGATCGGG CCGGTCGCCG TGTTCGGCGC GTCGAACTTC
CCCCTCGCGT TCTCGGTCGC GGGCGGCGAT ACCGCGTCGG CACTCGCGGC CGGCTGCCCG
GTGATCGTCA AGGCGCACTC CGCGCATCCG GGCACGTCCG AGTTCGTCGG CCGCGCGATC
CAGCAAGCCG TGCGCGAATA CGGGCTGCCG GCCGGCGTGT TCTCGCTGCT GTTCGACGCG
TCGCGCGAAA TCGGCCAGGC GCTCGTCGCC GATCCGCGCA TCAGGGCCGT CGGCTTCACC
GGCTCCCGCC GCGGCGGCGT CGCGCTGATG AACATCGCGG CCGCGCGCCA CGAGCCGATT
CCGGTCTATG CGGAAATGAG CTCGATCAAT CCGGTGCTGC TGTTCCCGGC CGCGCTCGAT
GCGCGCCACG ACACGATCGC GCCGCAGTTC GCCGCGTCGC TCGCGCTGGG TGCCGGCCAG
TTCTGCACGA ACCCGGGCCT CGTGCTCGCG GTCGACGGCC CCGCGCTGCG CGCGTTCGAA
GCCGCGGCGG CCTCCGCCGT GCAAGCGACC ACCGCGCAGA CGATGCTCAC GCCGCACATC
CACGCGAGCT ATGCGCAAGG CGTGGCCGCG CTGCGCGCGC ACGACGCGGT CGAGCTGCTG
GCGCAAGGGG TGGAAGGCGG CCGCTACCAG GCACGCGCGG CGCTGTTCGC GACATCGGCG
GACGCGTTCA TCGCGCACCC CGAACTGCGT GACGAAGTGT TTGGCCCCGC GTCGCTGATC
GTGCGCTGCC CGGATGCCGA CACGCTGCAT CGCGTGCTGA AGTCGCTCGA AGGCCAGTTG
ACGATCGCCG CGCATCTCGC CGACGGCGAT GCCGCGCTGT TTGCCGCGCT GCGCCCGACG
CTGGAGCGCA AGGCGGGCCG CATCCTCGTC AACGGCTTCG GCACGGGTGT CGAGGTCGGT
CACGCGATGG TGCATGGCGG CCCGTTCCCG GCCACGTCCG ACACGCGCAC CACGTCGGTC
GGTGCACGCG CGATCGAGCG TTTCCTGCGC CCCGTGTCGT ACCAGGACGT GCCGGATGCG
CTACTGCCCG ACGCCATCCG CACCGGCAAC CCGCTGAATG TGCCGCAACG CATCGACGGC
GTGCCCGCGC CGCGGGAAGC GCGCGATGTC TGA
 
Protein sequence
MQLTGQLLIG QSTIAGQNGT LHAIAAATGE PLDPAFGGAS LHDLETACAL ADDAFDTYRE 
TSPEQRAAFL DAIGRNIMAL GDDLIERCVT ETGLPRARIE GERGRTVGQL ALFASLVRDG
GYVDARIDPA RPDRKPLPRV DLRLRNIAIG PVAVFGASNF PLAFSVAGGD TASALAAGCP
VIVKAHSAHP GTSEFVGRAI QQAVREYGLP AGVFSLLFDA SREIGQALVA DPRIRAVGFT
GSRRGGVALM NIAAARHEPI PVYAEMSSIN PVLLFPAALD ARHDTIAPQF AASLALGAGQ
FCTNPGLVLA VDGPALRAFE AAAASAVQAT TAQTMLTPHI HASYAQGVAA LRAHDAVELL
AQGVEGGRYQ ARAALFATSA DAFIAHPELR DEVFGPASLI VRCPDADTLH RVLKSLEGQL
TIAAHLADGD AALFAALRPT LERKAGRILV NGFGTGVEVG HAMVHGGPFP ATSDTRTTSV
GARAIERFLR PVSYQDVPDA LLPDAIRTGN PLNVPQRIDG VPAPREARDV