Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3984 |
Symbol | |
ID | 6179354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 987114 |
End bp | 987677 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641683754 |
Product | peroxiredoxin |
Protein accession | YP_001810665 |
Protein GI | 172063014 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | [TIGR03137] peroxiredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.682619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.347189 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATCA TCAACACCCA AATCAAGCCG TTCAAGGCAA CCGCATACCA CAACGGCGAT TTCGTGCCCG TGACCGAAGA GAACTTCAAG GGCAAGTGGT CCGTCGTCGT GTTCTATCCG GCCGACTTCA CGTTCGTCTG CCCGACCGAG CTGGGCGACC TCGCCGACCG CTACGCGGAA TTCCAGAAGC TGGGTGTCGA AATCTACGGC GTGTCGACCG ATACGCACTT CACGCACAAG GCATGGCACG ACACGTCGGA CACGATCGGC AAGATCAAGT ACCCGATGAT CGGCGACCCG ACGCTCACGC TGTCGCGCAA CTTCGACGTG CTGATCGAGG AAGAAGGGAT GGCGCTGCGC GGCACGTTCG TGATCAACCC GGAAGGCGAG ATCAAGCTGT GCGAAATCCA CGACAACGGC ATCGGCCGCG ACGCAGGCGA ACTGCTGCGC AAGGTGCAGG CTGCGCAATA CATCGCGGCG CACCCGGGTG AAGTGTGCCC GGCCAAGTGG ACGCCGGGTG CGGAAACGCT GACCCCGTCG CTCGACCTGA TCGGCAAGAT CTGA
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Protein sequence | MPIINTQIKP FKATAYHNGD FVPVTEENFK GKWSVVVFYP ADFTFVCPTE LGDLADRYAE FQKLGVEIYG VSTDTHFTHK AWHDTSDTIG KIKYPMIGDP TLTLSRNFDV LIEEEGMALR GTFVINPEGE IKLCEIHDNG IGRDAGELLR KVQAAQYIAA HPGEVCPAKW TPGAETLTPS LDLIGKI
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