| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3965 |
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| Symbol | |
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| ID | 6181479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 968343 |
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| End bp | 969836 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641683735 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001810646 |
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| Protein GI | 172062995 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.17097 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACG TCAGCGAGCG CCCGGCCGAC ACGGCCGGCG GCGCGGATTC CCGTCATGCC
GAGCGCGATG CGATGTTCGC GTCGCACGAA GCCGGCTATT CGAAACAGTT GAAGCCGCGC
CACGTGCAGA TGATCGCGAT GGGCGGTGCG ATCGGCACCG GCCTCTTTCT CGGCGCGGGC
GGCCGCCTGC AGAGCGCGGG GCCCGCGCTG GCGGTCGTGT ATCTCGTGTG CGGCGTATTC
GCATTCCTGA TCATGCGCGC GCTCGGCGAG CTGGTGATGC ACCGGCCGAC CAGCGGCGCG
TTCGTGTCGT ACGCACGGGA GTTCATGGGC GAGCGCGCGT CGTTCGTCGC GGGCTGGATG
TACTACCTGA ACTGGGCGAC CACCGGCATC GTCGACATCA CCGCGGTCGC GATCTACATG
AAGTACTGGG CCGCGTTCTC GGACGTGCCG CAGTGGGTGT TCGCGCTCGG CGCGCTCGGC
ATCGTGTCGG TGATGAACAT GATCGGCGTG AAGGTGTTCG GCGAGATGGA GTTCTGGTTC
TCGATCGTGA AGGTGGGCAC GCTCGCGCTG TTCCTCGGGG TCGGCGCCGT GTTCCTCGCG
AGCGGCCATC CGGTCGCCGG CCAGATGCCG GGGCTGCACC TGATCGCGGA TCACGGCGGG
ATCTTTCCGC ACGGCATCCT GCCGGCGGTG CTGATCGTGC AGGGCGTCGT GTTCGCGTAT
GCGAGCATCG AGCTCGTCGG CGTCGCGGCG GGCGAGACCG CGGATGCGCG CAAGGTGCTG
CCGAAGGCAA TCAACAGCGT GATGTGGCGC ATCGCATTGT TCTACGTGGG CTCGGTCGTG
CTGCTGACGA TGCTGCTGCC GTGGACCGCG TACAGCGCGC ACGAAAGCCC GTTCGTGACG
TTCTTCGGCA AGCTCGGCGT GCCGTACGTC GGCACGGTGA TGAACGTCGT GGTGCTGACC
GCCGCGCTGT CGAGCCTGAA TTCCGGCCTC TATTCGACCG GGCGCGTGCT GCGTTCGCTC
GCGATGGGCG GCTCGGCGCC GCGCTTCGTG TCGCGGATGA ACGCGCGCGG CGTGCCGTAC
GGCGGGATCC TCGTCACGGT CGCGGTCAAC GCGATCGGCG TGCCGCTGAA CTACATCGTG
CCGGCGCAGG CGTTCGAGAT CGTGCTGAAC ATGGCGTCGC TCGGGATCAT CACGACCTGG
GGCTTCATCG TGATGTGCCA GATCCTGTTC CGCCGCGCGG TCAATCGCGG CGAGCTGAGC
CCCGTGTCGT TCCGGATGCC CGGCGCACCG TTCACGTCCT GGCTCACGCT CGGGTTTCTC
GCCAGCGTGC TCGTGTTGAT GGCGTTCGAT TACCCGGGCG GCACGTGGAC CGTCGGGATG
ATTCCGGTGG TCGTGCTCGC GCTCGTGATC GGCTGGAAGC TCGCGAAGCG GGGTGCCGCG
CGCGAGCGGG CAAGCGCCGC ACCGGCCATC GCCGATCCGG CGAGCAACGT CTGA
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| Protein sequence | MKHVSERPAD TAGGADSRHA ERDAMFASHE AGYSKQLKPR HVQMIAMGGA IGTGLFLGAG
GRLQSAGPAL AVVYLVCGVF AFLIMRALGE LVMHRPTSGA FVSYAREFMG ERASFVAGWM
YYLNWATTGI VDITAVAIYM KYWAAFSDVP QWVFALGALG IVSVMNMIGV KVFGEMEFWF
SIVKVGTLAL FLGVGAVFLA SGHPVAGQMP GLHLIADHGG IFPHGILPAV LIVQGVVFAY
ASIELVGVAA GETADARKVL PKAINSVMWR IALFYVGSVV LLTMLLPWTA YSAHESPFVT
FFGKLGVPYV GTVMNVVVLT AALSSLNSGL YSTGRVLRSL AMGGSAPRFV SRMNARGVPY
GGILVTVAVN AIGVPLNYIV PAQAFEIVLN MASLGIITTW GFIVMCQILF RRAVNRGELS
PVSFRMPGAP FTSWLTLGFL ASVLVLMAFD YPGGTWTVGM IPVVVLALVI GWKLAKRGAA
RERASAAPAI ADPASNV
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