| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3964 |
|---|
| Symbol | aspA |
|---|
| ID | 6181135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 966833 |
|---|
| End bp | 968239 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641683734 |
|---|
| Product | aspartate ammonia-lyase |
|---|
| Protein accession | YP_001810645 |
|---|
| Protein GI | 172062994 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1027] Aspartate ammonia-lyase |
|---|
| TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.256806 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCAA ACGGCTTTCG CGTCGAAGCG GATCTTTTAG GGAAGCGAAG CATTCCGAAC
GAGGCGTACT ACGGCGTCCA CACGCTGCGC GCCAAGGAGA ACTTCGACAT TTCGGGGCGC
ACGATCGCGT CGCTGCCGTA CTTCGTCATG GCGCTCGCGG CCGTGAAGGA AGCCGCCGCC
GACGCGAACT GCGAGCTCGG GCTCCTGCCG GCCGCGTATC GCGACGCGAT CGCCGCGGCG
TGCGTCGAGA TCCGCGAAGG TCGGCTGCAC GACCAGTTCG TGGTCGACAT CATCCAGGGC
GGCGCCGGCA CGTCGACCAA CATGAACGCG AACGAGGTGA TCTGCAACCG CGCGCTCGAA
ATCATGGGAC ACACGCGCGG CCAGTACGAA TACCTGCATC CGAACGAGCA CGTCAATCTC
GCGCAGAGCA CCAACGACGT CTATCCGACC GCGATCCGGA TCGCGACCTG CTTCGCGGTC
GAGCATCTGC TCGAGGCGAT GGCGCGCCTG CGCGATGCGT TCGCGGAGAA GGCCGACGCG
TTCTCGGATC TCCTGAAGCT CGGCCGCACG CAGTTGCAGG ACGCCGTGCC GATGACGCTC
GGCCAGGAAT TCTCGACCTA CGCGGTGATG GTGACGGAAG ACATCGCGCG CCTGCAGGAA
GCCGGCTGGC TGATGCGCGA GATCAATCTC GGCGCGACCG CGATCGGCAC CGGCATCACC
GCGCATCCGC AGTACGCGGA GAAGGCGCTG GCCGCGCTGC GCCGCATCAC CGGCCTGGAC
CTGAGCACCG CGCCGAACCT GATCGAGGCG ACGCAGGACT GCGGCGCGTT CGTGCAGATT
TCCGGCGTGC TCAAGCGCAT CGCGGTCAAG CTGTCGAAAA TCTGCAACGA CCTGCGGCTG
CTGTCGAGCG GCCCGCGCGC CGGGTTCGGC GAGATCAACC TGCCGCCGGT GCAGGCCGGC
TCGTCGATCA TGCCGGGCAA GGTGAACCCG GTGATTCCGG AGGTCGTCAA CCAGGTCGCG
TTCGAAGTGT TCGGCAACGA CCTGACGGTG ACGTTCGCCG CCGAGGCCGG CCAGCTTCAG
CTCAACGCGT TCGAGCCGGT GATCGCGAGC GCGCTGTTCC GCAGCTTCAG TCACCTGACG
GCCGCCTGCA CGACGCTCGC GGGCCGCTGC GTGAGCGGGA TCACCGCGAA CCCCGAGCGG
CTGCGTGACA CGATGGAGCG ATCGGTCGCG CTCGCGACCG CGCTGAACCC GTACATCGGC
TACAAGCGCG CGACCGCCGT GGCCGCCGAG GCGCACGCGA GTGGCAAGTC GATCCGCGAA
GTCGTGCTCG AGCGCGCGCT GATGACCGTC GCGCAACTGG ACGAAGCGCT GCAGCCCGAA
GCGCTGATCC GTCCGCGCGC GTACTGA
|
|---|
| Protein sequence | MTANGFRVEA DLLGKRSIPN EAYYGVHTLR AKENFDISGR TIASLPYFVM ALAAVKEAAA
DANCELGLLP AAYRDAIAAA CVEIREGRLH DQFVVDIIQG GAGTSTNMNA NEVICNRALE
IMGHTRGQYE YLHPNEHVNL AQSTNDVYPT AIRIATCFAV EHLLEAMARL RDAFAEKADA
FSDLLKLGRT QLQDAVPMTL GQEFSTYAVM VTEDIARLQE AGWLMREINL GATAIGTGIT
AHPQYAEKAL AALRRITGLD LSTAPNLIEA TQDCGAFVQI SGVLKRIAVK LSKICNDLRL
LSSGPRAGFG EINLPPVQAG SSIMPGKVNP VIPEVVNQVA FEVFGNDLTV TFAAEAGQLQ
LNAFEPVIAS ALFRSFSHLT AACTTLAGRC VSGITANPER LRDTMERSVA LATALNPYIG
YKRATAVAAE AHASGKSIRE VVLERALMTV AQLDEALQPE ALIRPRAY
|
|---|
| |