| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3866 |
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| Symbol | |
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| ID | 6179787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 860140 |
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| End bp | 861606 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641683637 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001810549 |
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| Protein GI | 172062898 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.377761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.957657 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAAG GCATACTCAA GAACGTTTCG ATCAACTTCA TCGGGCTGAT CCTGCCGACC
TTCGTGTCGC TGGTGACGGT GCCCGCCTAT ATCCACGCGC TGGGTGTCGA ACGCTATGGC
GTCGTCAGCC TCGTGTGGAC GCTGATCGGC TATTTCGGGA TCCTCGATCT CGGGATGAGC
ATGGCCGCGC AGAACCACAT CTCGAAGGCG CTCGCGAGCG GCAACGAGGA CGAAAGCGCG
CGGGTCTTCT GGAGCGCGTT CTGGCTGAAC CTCGGCACCG GCATCGTGGG CGGCCTGCTG
ATCTATTTCG GCGCGTTCGT CTACACCGCG TATTTCACGA AGGTGTCGGC AGCGATGCAG
CACGAGGTGT ATCTCGCGCT GCCGTGGCTC GCGCTCGCGA TTCCGCTCGC GAACGTGTCG
TGGGTGTTCG CCGGCGCGAT CAACGGCGCC GAACGGTTCG GCGTGTTCAA CACGAACCAG
ACGATCGGCA CGTTCCTGTT CCAGCTGCTG CCGCTCGCCG CCGCGTGGTG GATCGCGCCG
AACCTGCAGA CGGTGCTGGC GGCCGCGGTC GTCGCGCGGC TCGTCGCGGC GGTGATGCTC
GGTCACGCGA GCATCAAGGT GCTCGGGATC CGGCGCATCG ACCCGCCGCA GTGGGGCACC
GCGAAAGGGC TGTTCAACTT CGGCGGCTGG ATGCTGATCG CGAGCACGAC GAGCATGATC
GCCGACACGC TCGATCGCGT GATGCTCGGC GCCGGCATGG GCGCGAAGTT CGTCACCTAC
TACACGGTGC CGCAGAACCT CGTCACACGC CTGAACATGC TGCCGAACGC GCTGGTGCGC
ACGCTGTTCC CGCGCCTGTC GGCGGTCGGC CGCGATCACG CCGACACGCT CGCGCGCCAG
TCGCTCGAAT TCCTGAACGG CGTGTTCACG CCGGTCGGCA TCGTCGCGAT CTTCGCGCTC
GCGCCATTCC TCACGCTGTG GGTCGGCGCC GATCTCGCCG CGCATTCCGC GCCGGTCGGC
CGCGTGCTGG TGATCAGCGT ATGGCTGGTC GGCCAGGCGA GCGTCACGCG CATCCTGATC
CAGTCGCAGG TCAACCCGGC CCGCGCGGCG TTCGCCGGGC TCGTCGAGAT GCCGTTCTTC
GTCGGCGGCC TGTGGTTCGG CATTCATCAC TTCGGGCTCA TCGGCGCGGC GGTGGTCGTC
GCCGCCCGCG CGCTGGTCGA CTACGGCGTG CTGCTTTACC TGTCCGCAAT CCGGATGCGC
GCGATCTTGC TCGACATGCT CGCGCATCTC GCCTTCCTGC TCGCAAGCCT GTTTCTCGCG
CAAGCGTGGT CGGGGCTCGG CGAGTCGATC GGCCTGTGCG CGGTCGTGCT GCTGCTGAAC
CTTGCGTGGT CGCTCACGAT GACGCCGGGC CTGCGCGCGC TCGTGCGCGA CCTGTTCGTC
CGTCTCAATG CGAGGAAAAC CATATGA
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| Protein sequence | MDKGILKNVS INFIGLILPT FVSLVTVPAY IHALGVERYG VVSLVWTLIG YFGILDLGMS
MAAQNHISKA LASGNEDESA RVFWSAFWLN LGTGIVGGLL IYFGAFVYTA YFTKVSAAMQ
HEVYLALPWL ALAIPLANVS WVFAGAINGA ERFGVFNTNQ TIGTFLFQLL PLAAAWWIAP
NLQTVLAAAV VARLVAAVML GHASIKVLGI RRIDPPQWGT AKGLFNFGGW MLIASTTSMI
ADTLDRVMLG AGMGAKFVTY YTVPQNLVTR LNMLPNALVR TLFPRLSAVG RDHADTLARQ
SLEFLNGVFT PVGIVAIFAL APFLTLWVGA DLAAHSAPVG RVLVISVWLV GQASVTRILI
QSQVNPARAA FAGLVEMPFF VGGLWFGIHH FGLIGAAVVV AARALVDYGV LLYLSAIRMR
AILLDMLAHL AFLLASLFLA QAWSGLGESI GLCAVVLLLN LAWSLTMTPG LRALVRDLFV
RLNARKTI
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