| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3847 |
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| Symbol | |
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| ID | 6180342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 838096 |
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| End bp | 839163 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641683618 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001810530 |
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| Protein GI | 172062879 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.937841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTG CAGTGCTGCC CGGCGACGGC ATCGGTCCGG AAATCGTCAA CGAAGCCGTC
AAGGTGCTGA ACGCCCTCGA CGAACAGTTC GAACTCGAGC AGGCGCCGGT CGGCGGCGCG
GGCTACGAGG CGAGCGGTCA TCCGCTGCCG GACGCCACGC TGAAACTCGC GAAGGAAGCG
GACGCAATCC TGTTCGGCGC GGTCGGCGAC TGGAAGTACG ACTCGCTCGA GCGCGCGCTG
CGCCCCGAGC AGGCGATCCT CGGGCTGCGC AAGCACCTCG AGCTGTTCGC GAACTTCCGC
CCGGCGATCT GCTATCCGCA GCTCGTCGAT GCGTCGCCGC TGAAGCCGGA ACTGGTCGCG
GGCCTCGACA TCCTGATCGT GCGCGAACTG AACGGCGACA TCTATTTCGG CCAGCCGCGC
GGCGTGCGTG CGGCGCCGGA CGGCCCGTTC GCCGGCGCGC GCGAAGGCTT CGACACGATG
CGCTACTCGG AACCGGAAGT GCGCCGCATC GCGCACGTCG CGTTCCAGGC CGCGCAAAAG
CGTGCGAAGA AGCTGCTGTC GGTCGACAAG TCGAACGTGC TCGAAACGTC GCAGTTCTGG
CGCGACGTCA TGATCGACGT GTCCAAGGAA TATGCGGACG TCGAGCTGTC GCACATGTAC
GTCGACAACG CGGCGATGCA GCTCGCGAAG GCGCCGAAGC AGTTCGACGT GATCGTGACC
GGCAACATGT TCGGCGACAT CCTGTCGGAC GAAGCGTCGA TGCTGACGGG CTCGATCGGC
ATGCTGCCGT CGGCGTCGCT CGACAAGAAC AACAAGGGTC TGTACGAGCC GTCGCACGGT
TCGGCGCCGG ACATCGCGGG CAAGGGCATC GCGAATCCGC TCGCGACGAT CCTGTCGGCC
GCGATGATGC TGCGCTACTC GCTGAATCGC GCCGAGCAGG CCGATCGCAT CGAGCGCGCG
GTGAAAACGG TGCTCGAACA AGGCTATCGC ACCGGTGACA TCGCGACGCC GGGCTGCAAG
CAGGTCGGCA CGGCGGCGAT GGGCGATGCG GTTGTCGCCG CGCTGTAA
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| Protein sequence | MKIAVLPGDG IGPEIVNEAV KVLNALDEQF ELEQAPVGGA GYEASGHPLP DATLKLAKEA
DAILFGAVGD WKYDSLERAL RPEQAILGLR KHLELFANFR PAICYPQLVD ASPLKPELVA
GLDILIVREL NGDIYFGQPR GVRAAPDGPF AGAREGFDTM RYSEPEVRRI AHVAFQAAQK
RAKKLLSVDK SNVLETSQFW RDVMIDVSKE YADVELSHMY VDNAAMQLAK APKQFDVIVT
GNMFGDILSD EASMLTGSIG MLPSASLDKN NKGLYEPSHG SAPDIAGKGI ANPLATILSA
AMMLRYSLNR AEQADRIERA VKTVLEQGYR TGDIATPGCK QVGTAAMGDA VVAAL
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