Gene BamMC406_3811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3811 
Symbol 
ID6179615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp799793 
End bp801316 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content70% 
IMG OID641683582 
Producttranscriptional regulator 
Protein accessionYP_001810494 
Protein GI172062843 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACACCG TCATCGTCGC TGACTGGCTC TCGGGCCGGA TCGACCGCAG CTCGCCCGAA 
CCGATGTACC GCCAGTTGCT GCAACTGATG CAGCAGGCCA TCCTGACCGG GGAATTGGGG
CCGGGCACAA AACTGCCGAG TTCGCGCACG CTCGCGGCCG ACCTGTCGAT CGCGCGCAAT
ACCGTGCTGC ACGTGTACGA CCAGCTCACC GCCGAAGGCT ACGTGCTGAC CACGACCGGC
AGCGGCACCT ACGTGGCCGA CACGCGGCCG GACGCCGCCG TGATCCACGC ACCGGGCGCC
GCGCCACCGC CGTCAGCCGC CGACGAACCG CTGCTGCCGG ACGCGCACGG CGGCCTGTCG
ATGCGTGGCC GGCAGCTGAT CGAGCACGCA GGCGTGTCGC GACGTCAATG GGGCGCGTTC
ATGCCCGGCG TGCCGGACGT GTCGGAATTC CCGAGCCGCA CGTGGAGCCG CCTGCAGGCG
CGCCTGTGGA AGGAAGCGAA TCCGGAGCTG CTGACCTATG CGCCGGGCGG CGGCTACCGG
CCGCTGCGCC GCGCGCTCGC CGACTACCTG CGCGTCGCGC GCTCGGTCAA ATGCTCGCCG
GATCAGGTGA TCATCACGAC CGGCATCCAC CAGTCGATCG ACCTCGCGGT GCGGCTGCTG
TCCGACATCG GCGATCGCGC ATGGGTCGAG GAGCCGTGCT ACTGGGGCGT GCGCAGCGTG
CTGCAGGCGA CCGGCCTCAC GCTCACGCCG GTGCCGGTCG ACCAGGAAGG CATCGATCCG
AGCGCGGCCG ACATGCAGCA GCCGCCGCGG CTCGTGCTCG TCACGCCGTC GCACCAGTAT
CCGCTCGGGA TGGTGATGAG CCTCGCGCGG CGCCGGATGC TGCTCGAATA CGCGCGCCGG
CACCGCTGCT GGATCATCGA GGACGACTAC GACAGCGAAT TCCGCTACGG CAGCCGCCCG
CTCGCGTCGC TGCAGGGGCT CGACGACGGC GGCCGCGTGA TCTACGTGGG CAGCCTCGGC
AAGATGCTGT TCCCGGGCCT GCGGATGGGC TACATGGTCG TGCCCGAGCA TCTGGTCGAC
ACGTTCCGCA CCGGGCTGTC GGAGCTGTAT CGGGAGGGCC AGCTGATGCA GCAGGCCGTG
CTCGCCGAGT TCATCATGGA CGGGCACCTG ACTTCGCACG TCAGACGAAT GCGCACGCTG
TACGGCGAGC GCCGGCAATT GCTGATCGAT GCGATCCACG CGCGCTTCGG CGACGCGCTG
CCGGTGATGG GCGACGAAGC CGGCCTGCAT CTGGTGCTCG GCCTGCCCGA CGCATGCGAC
GATCGCGCGG TCACGCAAAG CGCGTTCGAC GCGGGCGTGA TCGTACGCCC GCTGACCAGC
TACTACAGCC GGCTGGACAC GGCACGCCGC GGCCTGCTGC TCGGTTATGC GTGCGTCGCG
CACGAAGGCA TCGGCCCCGC GTTCGACACG CTCGCGGCAA CCATCGAACA GCACCTGCCG
CGGCACTTCA CGCGCGCGGC GTGA
 
Protein sequence
MDTVIVADWL SGRIDRSSPE PMYRQLLQLM QQAILTGELG PGTKLPSSRT LAADLSIARN 
TVLHVYDQLT AEGYVLTTTG SGTYVADTRP DAAVIHAPGA APPPSAADEP LLPDAHGGLS
MRGRQLIEHA GVSRRQWGAF MPGVPDVSEF PSRTWSRLQA RLWKEANPEL LTYAPGGGYR
PLRRALADYL RVARSVKCSP DQVIITTGIH QSIDLAVRLL SDIGDRAWVE EPCYWGVRSV
LQATGLTLTP VPVDQEGIDP SAADMQQPPR LVLVTPSHQY PLGMVMSLAR RRMLLEYARR
HRCWIIEDDY DSEFRYGSRP LASLQGLDDG GRVIYVGSLG KMLFPGLRMG YMVVPEHLVD
TFRTGLSELY REGQLMQQAV LAEFIMDGHL TSHVRRMRTL YGERRQLLID AIHARFGDAL
PVMGDEAGLH LVLGLPDACD DRAVTQSAFD AGVIVRPLTS YYSRLDTARR GLLLGYACVA
HEGIGPAFDT LAATIEQHLP RHFTRAA