Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3727 |
Symbol | |
ID | 6180458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 695203 |
End bp | 697428 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641683497 |
Product | exopolysaccharide tyrosine-protein kinase |
Protein accession | YP_001810410 |
Protein GI | 172062759 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.601241 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGAACA CGCAAGCAAA ACACACCTAC GCGGGTCCGG CCGCGAAAAC CGAGGAAGAG GACGTCGTCC TCGGCCAGTT GCTCCAGGTG ATCATGGACG ACATCTGGCT GCTGCTCGGC ATCGCGGTGA CCGTCATCGC GCTCGCCGGC CTGTACTGCT TCGTCGCGAA GCCGGTCTAT CAGGCCGACG TGCACGTGCG GGTCGAGGGC AACGACAATA CGTCGCAGGC GCTCACGCAG ACGCAGACGG GTGCATCGAT CAACAGCGGT CCGCAGCAGG CGCCGACCGA TGCGGAAATC GAGATCATCA AGAGCCGCGG CGTCGTCGCG CCGGTCGTCG AGGAGTTCAA GCTGAACTTC TCGGTCGTGC CGAAGACGAT GCCGCTGATC GGCAGCCTGG CCGCGCGCAT CGCGACGCCG GGCGAGCCGT CGCGCGCGTG GTTCGGCCTG CGGTCGTACG CGTGGGGCGG CGAAGTCGCC GATATCGACT CGATCAACGT CGTGCCCGAG CTCGAAGGCA AGAAGATGAC GCTGACGGCC GGCCCGAACG GCACCTACAC GGTCGTCGAC CAGAACGGCC GCCGCCTGCT GTCGGGCCGC GTCGGCGAAT CGGAGCAGGG CGGCGGCGTC ACGCTGCTCG TGCAGAAGCT CGTCGCGCGT CCGGGCACGC AGTTCACGGT GGTCCGCTAC AACGATCTCG ACGCGATCAC CGGCTTCCAG TCGGGCATCC AGGTGAGCGA GCAGGGCAAG CAGACGGGCG TCGTGCAGAT CTCGCTCGAA GGCAAGAATC CGGACCAGAC GGCCGCGATC GCGAATGCGC TCGCGCGGTC GTACCTGAAC CAGCACGTGA TCGCGAAGCA GGCCGAAGCG ACCAAGATGC TCGACTTCCT GAAGGGCGAG GAACCGCGCC TGAAGGCCGA CCTCGAGCGT GCGGAAGCCG CGCTGACGCA GTATCAGCGC ACGTCCGGCT CGATCAACGC GAGCGACGAG GCGAAGGTCT ACCTGCAGGG CAGCGTGCAG TACGAGCAGC AGATCGCCGC GCAGCGCCTG CAGCTCGCGT CGCTCGCGCA GCGCTTCACC GACTCGCACC CGATGGTGAT CGCCGCGAAG CAGCAGCTCG CGGAGCTGCA GGGCGAGAAG GACAAGTTCA GCAACCGGTT CCGCAGCCTG CCGGCGACCG AAGTGAAGGC CGTCCAGCTC CAGCGCGACG CGAAGGTCGC CGAGGACATC TACGTGCTGC TGCTGAACCG CGTGCAGGAA CTGTCGGTGC AGAAGGCCGG CACGGGCGGC AACATCCACC TCATCGACTC GGCGTTGCGC CCGGGCGACC CGATCAAGCC GAAGAAGGTG CTGATCCTGT CGGCCGCGGT GTTCCTGGGG CTGATCCTCG GCACCGGCGT CGTGTTCCTG CGCCGCAACC TGTTCCAGGG CATCGAGGAT CCGGACCGTG TCGAGCGCAC GTTCAACCTG CCGCTGTACG GGCTGGTGCC GCAAAGCGCC GAGCAGGTGA AGCTCGACGC GATGGCCGAG AAGGGCGGCG GCCGTGCGCG GCCGATCCTC GCGAGCCTGC GCCCGAAGGA CCTGAGCGTC GAAAGCATGC GCAGCCTGCG CACCGCGATG CAGTTCGCGA TGATGGACGC GAAGAACCGC GTGATCGTGC TGACCGGCCC GACGCCGGGG ATCGGCAAGA GCTTCCTGAC GGTCAATCTC GCGGTGCTGC TCGCGCATTC GGGCAAGCGC GTGCTGCTGA TCGACGCCGA CATGCGCCGC GGGATGCTCG ACCGCTACTT CGGCCTCACC GCGCAGCCGG GCCTGTCCGA GCTGCTGAGC GACCAGTCGG CGCTCGAGGA CGCGATCCGC GAGACGCCGG TGCAGGGCCT GTCGTTCATC TCGGCCGGCA CGCGCCCGCC GAACCCGTCG GAGCTGCTGA TGTCGACGCG TCTGCCGCAA TACCTCGAAG GGCTCGGCAA GCGCTACGAC ATCGTGTTGA TCGACTCGCC GCCGGTGCTG GCGGTGACCG ACGCGACCAT CATCGGCCGC ATGGCCGGCG CGACCTTCCT GGTGCTGCGC TCGGGCATGC ATACCGAAGG CGAGATCGCC GACGCGATCA AGCGCCTGCG CACCGCGGGC GTCGATCTGG AAGGCGGGAT CTTCAACGGC GTGCCGCCGA AGGCGCGCGG CTACGGCCGC GGCTATGCGG CCGTCCACGA ATACCTGAGC GCCTGA
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Protein sequence | MVNTQAKHTY AGPAAKTEEE DVVLGQLLQV IMDDIWLLLG IAVTVIALAG LYCFVAKPVY QADVHVRVEG NDNTSQALTQ TQTGASINSG PQQAPTDAEI EIIKSRGVVA PVVEEFKLNF SVVPKTMPLI GSLAARIATP GEPSRAWFGL RSYAWGGEVA DIDSINVVPE LEGKKMTLTA GPNGTYTVVD QNGRRLLSGR VGESEQGGGV TLLVQKLVAR PGTQFTVVRY NDLDAITGFQ SGIQVSEQGK QTGVVQISLE GKNPDQTAAI ANALARSYLN QHVIAKQAEA TKMLDFLKGE EPRLKADLER AEAALTQYQR TSGSINASDE AKVYLQGSVQ YEQQIAAQRL QLASLAQRFT DSHPMVIAAK QQLAELQGEK DKFSNRFRSL PATEVKAVQL QRDAKVAEDI YVLLLNRVQE LSVQKAGTGG NIHLIDSALR PGDPIKPKKV LILSAAVFLG LILGTGVVFL RRNLFQGIED PDRVERTFNL PLYGLVPQSA EQVKLDAMAE KGGGRARPIL ASLRPKDLSV ESMRSLRTAM QFAMMDAKNR VIVLTGPTPG IGKSFLTVNL AVLLAHSGKR VLLIDADMRR GMLDRYFGLT AQPGLSELLS DQSALEDAIR ETPVQGLSFI SAGTRPPNPS ELLMSTRLPQ YLEGLGKRYD IVLIDSPPVL AVTDATIIGR MAGATFLVLR SGMHTEGEIA DAIKRLRTAG VDLEGGIFNG VPPKARGYGR GYAAVHEYLS A
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