| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3719 |
|---|
| Symbol | |
|---|
| ID | 6179671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 684954 |
|---|
| End bp | 686291 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641683489 |
|---|
| Product | Fe-S oxidoreductase-like protein |
|---|
| Protein accession | YP_001810402 |
|---|
| Protein GI | 172062751 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.320551 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCACA AGGAAGGTAG CCTCGAAGCC CCGACGCGGC ATCCGCTCGA CTGGCAGTCC
GAAGCGTTCT ACGACCAGGC CGCGATCGAT GCGGAAATGA CGCGCGTGTT CGACATCTGC
GCGGGGTGCC GGCGCTGCGT GTCGCTGTGC GGCGCATTCC CCACGTTGTT CGATCTCGTC
GACGACACGC CGATGGGCGA CATCGACGAA GTGCCGAAGG CGGCGTTCGG CAAGGTCGTC
GACCAGTGCT ACCTGTGCGA TCTCTGCTAC ATGACGAAAT GTCCGTACGT GCCGCCGCAC
GCATGGAACG TCGACTTCCC GCACCTGATG CTGCGGGGGA AGGCAGCGCG CTACCAGCGC
GGCGAAGCGC CGCTGCGCGA CAAGGTGCTG TCGAACACCG ACGCGCTCGG GCATTTCGCG
GGCATTCCGA TCGTCACGCA GGCGGTGAAC GCGGTGAACC GCACGCCGCC CGCGCGGCAC
GCGCTCGAAG CGGCGCTCGG CGTCGATCGC GACGCGTGGC TGCCGGAGTT CGCGCCGCGC
AAGTTCCGGC GCACCGCGAA GCGCTCGGAC GGCCTGCCGG TGCGCGACGG CGAGCGCACG
CCCGGCAAGG TCGCGATCTA TGCGACGTGC TACGTAAACT TCAACGAGCC GGGCATCGGC
CACGACCTGC TCGCGATCCT CGCGCACAAC GAGATCCCGT ACGAGCTCGT CACGCGCGAA
GCCTGCTGCG GCATGCCGTT GCTCGAGCAA GGCAATCTAG CGGGCGTCGC CGCGAAGAAG
GCCGTGAACA TGCCGGTGCT GGAGCGCTAT GCGCGCGAAG GCTATGCGCT GATCGGCGCG
ATCCCGAGCT GCGTGCTGAT GTACAAGAGC GAACTGCCGC TGATGTTCCC CGACGACGAA
GCCGTGCGCG CGGTGGCCGA CGCATTCTGG GATCCGTTCG AATACGTGAT CGCGCGGCAT
CGCGACGGTT TGCTGAAGAC CGATTTCAAG CAGGGCCTCG GCACCGTGTC GTATCACGTG
CCGTGCCACG CGCGCGTGCA GAACATCGGC CGCAAGACGG CCGACACGCT GTCGCTCGTG
CCCGATACGC GCGTGAACGT GGTCGAGCGC TGTTCGGGGC ACGCGGGCAC GTTCGGCGTG
AAGAAGGGCT TCCATGCCGA TGCGATGCGG ATCGGCGCGC CCGTGTTCAA GGCAATGGCC
GAGCCGAAGC CGGACTTCGT GTCGTCGGAC TGCGCGCTCG CCGGCCATCA CATCGTGCAG
GGCATCGACG AGAAGGGACT GCCGGCCGCG CCGCTCGCGC ATCCGCTGAC GCTGCTACGC
CGCGCGTACG GCATCTGA
|
|---|
| Protein sequence | MPHKEGSLEA PTRHPLDWQS EAFYDQAAID AEMTRVFDIC AGCRRCVSLC GAFPTLFDLV
DDTPMGDIDE VPKAAFGKVV DQCYLCDLCY MTKCPYVPPH AWNVDFPHLM LRGKAARYQR
GEAPLRDKVL SNTDALGHFA GIPIVTQAVN AVNRTPPARH ALEAALGVDR DAWLPEFAPR
KFRRTAKRSD GLPVRDGERT PGKVAIYATC YVNFNEPGIG HDLLAILAHN EIPYELVTRE
ACCGMPLLEQ GNLAGVAAKK AVNMPVLERY AREGYALIGA IPSCVLMYKS ELPLMFPDDE
AVRAVADAFW DPFEYVIARH RDGLLKTDFK QGLGTVSYHV PCHARVQNIG RKTADTLSLV
PDTRVNVVER CSGHAGTFGV KKGFHADAMR IGAPVFKAMA EPKPDFVSSD CALAGHHIVQ
GIDEKGLPAA PLAHPLTLLR RAYGI
|
|---|
| |