| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3717 |
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| Symbol | |
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| ID | 6179669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 681295 |
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| End bp | 684066 |
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| Gene Length | 2772 bp |
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| Protein Length | 923 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641683487 |
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| Product | filamentous haemagglutinin outer membrane protein |
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| Protein accession | YP_001810400 |
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| Protein GI | 172062749 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.123962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.562424 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATC AACAACACCA TCGCCCGCGT GCGGCGACGC CAGCCGCGCG CACTACGCTC
GCCGCAGCGC TGACGCTCGC GATGCCGATC CTCGCGGCGC AGCCCGCGTT TGCGCAACCG
GGGCTCGTCG TCGATCCGAA CGCGGCGAAC CGTCCCGGTA TCACGAACGG GCCGAACGGC
ACGCCGATCG TCGGCATTAA CGCACCGGAT GCCGCCGGCA TTTCGGCCAA CCGCTTCACC
GAATACAACG TCGGGCCGGC AGGTCTCGTG CTGAACAACA GTGTGAACGG CACGAACACG
CAGCTGGCGG GCAGCATCGA CGGCAATGCG CGGCTCGGCG GGCGTTCGGC GCAGGTCATC
CTGAACCAGG TGACGGGCGG CAACGCATCG GTGCTCGCAG GGGCGACCGA AGTCGCGGGT
CAGCAGGCGC GCGTGATCGT CGCGAACCCG AACGGGATCG GCGTGAACGG CGCGAGCTTC
ATCAACGCGA GCCGCGTGTC GCTCGTCGCG GGCACGACGG AATTCGACGA GGACGGCCGT
ATCGCACGAT TCCGGACCGA GAACGGCCGC ATCACGATCG ACGGCGCCGG GCTCGACGCG
CGCAATCTGG ACCAGCTCGA TCTCGTGTCG CGCAGCCTGA AGGTGAACGC CGCGTTGCAC
GCGAAGAAAC TGGTCGCGGT CGCGCAACAA GGGACGGCGG CCATCGAGAA TCCTCAGGCG
ATGTCGTTCG ATGCGTCGAC GAGCGGGGAA CTGCCGCGCG TCGCGATCGA CGTGTCGCGA
CTCGGCAGCG TGCATGGAGA GGATTCGATC GTCATGCGCG GCACGTCGGC GGGCGTCGGC
ATCAATATCT CGGGCAAGGT CGAGGCGCTC ACGGGCTCGG TGACGTTGCT GTCGGATGGC
AGGGTCCGGA TTTCGGGCGG CGGATCGCTG CGCGCGGGGA CGCTCTCGGC TCCGTCCGGT
CTGCAGTACG GCGGGAACTG GACGGACGAT GACGAGGCGG CGAAGCCGCC GGTCGAGCCG
GAGCCGCCGG TAGCGGAGAC GAAGCCGCCG GTCGAGCCGG AGCCGCCGGT AGCCGAGACG
AAGCCGCCGG TCGAGCCGGA ACCGCCGGTA GCCGAGACGA AGCCGCCGGT CGAGCCGGAG
CCGCCGGTAG CGGAGACGAA GCCGCCGGTC GAGCCGGAAC CGCCGGTAGC CGAGACGAAG
CCGCCGGTCG AGCCGGAACC GCCGGTAGCG GAGACGAAGC CGCCGGTCGA GCCGGAGCCG
CCGGTAGCGG AGACGAAGCC GCCGGTCGAG CCGGAACCGC CGGTAGCGGA GACGAAGCCG
CCGGTCGAGC CGGAACCGCC GATCGCCGAA ACGAACCCGA AACTCGTCGT CGATCCGAAC
GCGGCCAACC GTCCCGGTCT CGGCGCCGCG CCGAACGGCA CGCCGATCGT CGACATCAAT
GCGGCGGACG CCTCCGGCAT TTCCTCGAAC CGCTTTCTCG ACTACAACGT CGGCCCGAAC
GGTCTCGTGC TGAACAACAG CGTGAACCGC ACGAACACGC AGCTGGCGGG CAGCATCGAC
GGCAATGCGC GGCTCGGCGG CCGTTCGGCG CAGGTCATCC TGAACCAGGT GACGGGCGGC
AACGCATCGG TGCTGGCCGG GGCGACTGAA GTCGCGGGGC AGCAGGCGCG CGTGATCGTC
GCGAACCCGA ACGGGATCAG CGTGAATGGC GCGAGCTTCA TCAACGCGAG CCGCGCGTCG
CTCGTCGCGG GCACGACGGA ATTCGACGAG GACGGCCGTA TCGCACGATT CCGGACCGAG
AACGGCCGCA TCGCGATCGA CGGCGCCGGG CTCGACGCGC GCAATATGGA TCAGCTCGAT
CTCGTGTCGC GCGGCCTGAA GGTCGATGCG GCGGTGCGCG CTAAGAAGCT GGTCGCGATC
GCGCATCAAG GCACGGCGGC AATCGAGCAA TCGAACCGGC AGACGCTCTC CGGCTCGGCA
AGCGGCAAGG CGCCGGCCGC GGCGATCGAC GTGTCCGAAT CGGGCAGCCT GCGGGCGGAC
GAGATCGCGC TGATCGGCGC GTCCGCGAAA ACCGGCGTCC GGATCGCCGG CACGGTCGAC
GCCGATACCG TCGACGTGTC CGGTCGCCTC GACAACGACG GTTCCGTGCG CGGGCGCAGC
GTCAGGATTG CCGGCGACGC GACCAATTCC GGCACGCTGC ACGCGGAAAA GTTGCTCGCG
ATGGGGAACG TGACCAACGG CGGCACGATC GAGGCAGGTG ACGTTCAGGT CATGGGCAAT
ACGACCAACA ACGGGACGCT GCGCGCGGAG AAGTTGCTCG CGATGGGGAA CGTGACCAAC
GGCAGCACGA TCGAGGCAGG TGACGTTCAG GTCATGGGCA ATACGACCAA CAACGGCGCG
CTGCGTGCGA AGAAGTTGTT TTCCACGTCG GGCAACATGA CCAACCGCGG CACGATCGAG
GGCGGCGACG TCAAGGTCAT GGGCAACACG ACCAACGACG GCACGCTGCG CGCGGAGAAG
TTGCTCTCCG CGATGGGCAA CGTGACCAAC CGCGGCACGA TCGAGGCCGG CGCCGTCAAG
GTCATGGGCA AAGTGACCAA CGACGGCACG TTGCACGGCG ACGATTCGGT ATCGGTGATG
GGCCGCCTGT ACAACGGGTT GTCGGGTGTC ACGAGCAGCT ACGGCAACGT GTTCGGCGCT
GGGCGCGTGT CCGGTCCGGG GCGCATCGTC AGCTACATGG TGCGTCCGAC GCCTGCCGGC
GACGTTCGAT AA
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| Protein sequence | MKHQQHHRPR AATPAARTTL AAALTLAMPI LAAQPAFAQP GLVVDPNAAN RPGITNGPNG
TPIVGINAPD AAGISANRFT EYNVGPAGLV LNNSVNGTNT QLAGSIDGNA RLGGRSAQVI
LNQVTGGNAS VLAGATEVAG QQARVIVANP NGIGVNGASF INASRVSLVA GTTEFDEDGR
IARFRTENGR ITIDGAGLDA RNLDQLDLVS RSLKVNAALH AKKLVAVAQQ GTAAIENPQA
MSFDASTSGE LPRVAIDVSR LGSVHGEDSI VMRGTSAGVG INISGKVEAL TGSVTLLSDG
RVRISGGGSL RAGTLSAPSG LQYGGNWTDD DEAAKPPVEP EPPVAETKPP VEPEPPVAET
KPPVEPEPPV AETKPPVEPE PPVAETKPPV EPEPPVAETK PPVEPEPPVA ETKPPVEPEP
PVAETKPPVE PEPPVAETKP PVEPEPPIAE TNPKLVVDPN AANRPGLGAA PNGTPIVDIN
AADASGISSN RFLDYNVGPN GLVLNNSVNR TNTQLAGSID GNARLGGRSA QVILNQVTGG
NASVLAGATE VAGQQARVIV ANPNGISVNG ASFINASRAS LVAGTTEFDE DGRIARFRTE
NGRIAIDGAG LDARNMDQLD LVSRGLKVDA AVRAKKLVAI AHQGTAAIEQ SNRQTLSGSA
SGKAPAAAID VSESGSLRAD EIALIGASAK TGVRIAGTVD ADTVDVSGRL DNDGSVRGRS
VRIAGDATNS GTLHAEKLLA MGNVTNGGTI EAGDVQVMGN TTNNGTLRAE KLLAMGNVTN
GSTIEAGDVQ VMGNTTNNGA LRAKKLFSTS GNMTNRGTIE GGDVKVMGNT TNDGTLRAEK
LLSAMGNVTN RGTIEAGAVK VMGKVTNDGT LHGDDSVSVM GRLYNGLSGV TSSYGNVFGA
GRVSGPGRIV SYMVRPTPAG DVR
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