| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3658 |
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| Symbol | |
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| ID | 6180390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 614369 |
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| End bp | 615493 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641683428 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001810341 |
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| Protein GI | 172062690 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.44997 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.507038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAT CGATCGATCG GATGAGCGCC GAAGCCGCTG AATCGAAGGG TCTGCCGGCC
GTGGTTGCGA GGCTGTTCGA GCGGGCGCCG AAGATGACTT TCATGCAGTT CTGTCGTCTT
TTGGAGGCAT GTGCGCCCGA ACGTCCCGGA TTCGGCACAC GCGACACGCC GGCGTACGAG
CCGGTGAGAT TCCGGCCGCG TCCTCGGTTG GGGTTCCCGG CAGGCGAGAT GGCCGCGGTC
GAATTCGACG ACGAGCATCC CGATGCGCCG CCGACCGTAC GCACGACCTT CATGGGGCTT
TACGGCGTCG ATGCCGCGAT GCCGTCGCAT ACGATCGACG AGATCGCGTT GCGCGAAGAG
GGGCATGAGG CGGTGGAAGC CTTTCTCGAT CCATTCAATC ACCGCATCGC GACGTTGCTG
TATCGCGCAT GGAAGAAGTA TCGGTATCCT GAGCGTTTCC GGGCCGGTGG TGTCGACGAT
TATTCGCAGA GCCTGTTGTG TCTGCTGGGG TTCGGATGGG GCGACAAGCC TTTGCGGGCA
GGCCTGCCGG ATTCGCGGAT GCTCGCGTTG TCGGGGCTGC TGATCCAGCG CACGCGGACG
TCCGAAGGGC TCGCCGGTGT GGTGGCGCTC GCCGCGCCGG GGGCGGAGGT TCGCGTCGAC
GAGTTCTGGG CGGTGACGAC GAGTACCGGT CGGCCGAAGC CGTTGACGTC GACGAAGCCG
GCTGCGGGCG GGCTGTCGGA CGGCAAGCGC AACGGGCTCG GTGGCGGTTA CGTGCTCGGC
AGGCGTCTCA CGTATCGCAG CCGGGCAGTG CGCGTGACGT TGCGGCCAGC CGATGCGCGG
CAGGCTCAGG ATCTGCTGCC GGGCGCATGG CTGCATCGAG AGGTGATGGC ATTCATCCAG
CTGTATGTCG GCATCAAGGC CGATGTGTAT TTGCGGATGG AGGTGTCGTC ACGGTTCGTT
CCGCATCCGT CCGTCGGCAT CGAGCGTACC GGCCCGGCGC CGCGTCTCGG CTGGACGACG
GTGTTGCCGT CTGCCGACGA ACGGCTGATC GATATTGCGC TGGGTGCCTA CGAGGCATTG
CCGGCGCCGC AACCCAACCC GCATCTCGTG CCGCGCACGA TCTGA
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| Protein sequence | MSASIDRMSA EAAESKGLPA VVARLFERAP KMTFMQFCRL LEACAPERPG FGTRDTPAYE
PVRFRPRPRL GFPAGEMAAV EFDDEHPDAP PTVRTTFMGL YGVDAAMPSH TIDEIALREE
GHEAVEAFLD PFNHRIATLL YRAWKKYRYP ERFRAGGVDD YSQSLLCLLG FGWGDKPLRA
GLPDSRMLAL SGLLIQRTRT SEGLAGVVAL AAPGAEVRVD EFWAVTTSTG RPKPLTSTKP
AAGGLSDGKR NGLGGGYVLG RRLTYRSRAV RVTLRPADAR QAQDLLPGAW LHREVMAFIQ
LYVGIKADVY LRMEVSSRFV PHPSVGIERT GPAPRLGWTT VLPSADERLI DIALGAYEAL
PAPQPNPHLV PRTI
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