| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3650 |
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| Symbol | |
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| ID | 6180539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 597200 |
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| End bp | 598750 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641683420 |
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| Product | EvpB family type VI secretion protein |
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| Protein accession | YP_001810333 |
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| Protein GI | 172062682 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.453281 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACA CTGAAACGCA GCACGCCGGC GCGAGCGAGA CCGTCGTGCT GGACGCCCCG
CACGGGGATA TCGACAGCGT CTATGCGTCG CTGTGCAGCA AGATCAACCT GAAGCCCGTC
AGCGAAGCGC GCCCGCTCGA GGCGTTCCGC GACAACGACA TGCTGTCCGA GGCGTCGGCC
GACGAGCGCA TCGCGCGCGG GATGGGCGCA TTCCTCGAAC TCGTCGCGAA CGCGCGCCAG
CCGGTGGACC GCCTCGACAA GTCGCTGCTC GATTTCCATA TCGGCCAGAT CGACCGGCAG
ATCAGCCGTC AACTCGACGC CGTGATGCAT ACGCCGGAAT TCCAGGCGCT CGAGGCACGC
TGGCGCGGCC TGAAGATGCT CGTAAGCCGC ACCGATTTCC GCAAGAACGC ACGCATCGAA
GTGCTTGACG TGTCGAAGGA CGCGCTGCAG CGCGACTTCG AGGATACGCC GGAACTGATC
CAGAGCGGCC TGTACCGCCT GACGTACATC GAGGAATACG ACACGCCGGG CGGTCAGCCG
ATCAGCGCGA TGATCAGCGA CTTCGAGTTC GCGAATTCGC CGATGGACGT CGCACTGCTG
CGCAACATCT CGAAGGTGGC GGCCGCCGCG CACATGCCGT TCATCGGCTC GGTCGGGCCG
GCGTTCTTCG GCAAGCAGTC GATGGAGGAA GTTGCCGCGA TCCAGGATAT CGGCAACTAC
TTCGATCGCG CCGAGTACAT CAAGTGGAAG AGCTTCCGCG ATACCGACGA TGCGCGTTAC
GTCGGCCTGA CGATGCCGCG CGTGCTCGGC CGCTTGCCGT ACGGCAAGGA CACGGCGCCG
GTGCGCGCGT TCAACTACGA GGAGGCCGTC AAGGGCCCCG ACCACGACAA GTACCTGTGG
ATGAATGCGT CGTTCGCGTT CGCGGCGAAC ATGGTGCGCA GCTTCGTGAG CAACGGCTGG
TGCGTGCAGA TTCGCGGACC GCAGGCGGGC GGCAAGGTCG AGGACCTGCC GGTTCACCTG
TACGACCTCG GCACCGGCCA CCAGCCGAAG ATCCCGACCG AGGTGCTGAT CCCCGAAACG
CGCGAATTCG AGTTCGCGAA TCTCGGCTTC ATTCCGCTGT CGTTCTACAA GAACCACGAC
TTCGCGTGCT TCTTCTCCGC GAACTCGGCG CAGAAGCCGG CGCTGTACGA GACCCGGGAA
GCGACCGCGA ACAGCCGCAT CAACGCACGG CTGCCGTACA TCTTCCTGCT GTCGCGCATC
GCGCACTACC TCAAGCTGAT CCAGCGGGAG AACATCGGCA CGACCAAGGA TCGTCGTCTG
CTCGAGCTCG AGTTGAACAA CTGGATCAAG GGGCTCGTGA CCGAGATGAA GGATCCGGGT
GACGAACTGC AGGCGTCGCA TCCGTTGCGC GAGGCGAAGG TCACGGTCGA GGACATCGAG
GACAATCCGG GCTTCTTCCG GATCAAGCTG TTCATCGTCC CGCACTTCCA GGTCGAAGGC
ATGGACATCG GGCTGTCGCT CGTGTCGCAG ATGCCGAAGT CCAAGAACTG A
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| Protein sequence | MKYTETQHAG ASETVVLDAP HGDIDSVYAS LCSKINLKPV SEARPLEAFR DNDMLSEASA
DERIARGMGA FLELVANARQ PVDRLDKSLL DFHIGQIDRQ ISRQLDAVMH TPEFQALEAR
WRGLKMLVSR TDFRKNARIE VLDVSKDALQ RDFEDTPELI QSGLYRLTYI EEYDTPGGQP
ISAMISDFEF ANSPMDVALL RNISKVAAAA HMPFIGSVGP AFFGKQSMEE VAAIQDIGNY
FDRAEYIKWK SFRDTDDARY VGLTMPRVLG RLPYGKDTAP VRAFNYEEAV KGPDHDKYLW
MNASFAFAAN MVRSFVSNGW CVQIRGPQAG GKVEDLPVHL YDLGTGHQPK IPTEVLIPET
REFEFANLGF IPLSFYKNHD FACFFSANSA QKPALYETRE ATANSRINAR LPYIFLLSRI
AHYLKLIQRE NIGTTKDRRL LELELNNWIK GLVTEMKDPG DELQASHPLR EAKVTVEDIE
DNPGFFRIKL FIVPHFQVEG MDIGLSLVSQ MPKSKN
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