Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3642 |
Symbol | |
ID | 6180039 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 587554 |
End bp | 588339 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641683412 |
Product | ribosyldihydronicotinamide dehydrogenase (quinone) |
Protein accession | YP_001810325 |
Protein GI | 172062674 |
COG category | [R] General function prediction only |
COG ID | [COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.750916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.729686 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGTGC TGATCGTCTA TGCCCATCCC GAACCGCGTT CGCTCAACGG CGCGTTGCGG GACTTCGCGG TCGAGCATCT CGAAGCGGCC GGCCATGCCG TGCAGGTGAC CGATCTGTAC GCGATGAACT GGAAGGCCGC GTTCGACGCG CATGACGTGA CCCACCGTGC GCCCGACGCA CGTTTCGATC CCGCGCTCGA TTCGAAGCGT GCGTTCGAGA CGGGCACGCA GCGCGACGAC ATCGCGCGCG AACAGGACAA GCTGAAGTGG GCCGACGCGG TGATCCTGCA GTTTCCGCTG TGGTGGTTCT CGATGCCGGC GATCATGAAG GGCTGGGTCG AGCGTGTGTA TGCGTACGGC TTCGCGTACG GCGTCGGCGA GCATTCCGAC CGGCACTGGG GCGACCGTTA CGGAGAGGGC TCGCTGGCGG GCAAGCGTGC GATGGTGATC GTCACGACGG GGGGCTGGGA GTCGCACTAC AGTGCGCGCG GCATCAACGG GCCGATCGAC GACGTGCTGT TTCCGATCCA GCACGGCATT TTGTATTACC CGGGGTTCGA CGTGCTGCCG CCGTTCGTGA TCTACCGGAC GGGGCGGATG AACGACGCTC GCTTCGACGA AACGCGCGCG GCGCTCGGCA AGCGTCTCGA CGAACTGTGG AGCGTACGGC CGATTCCGTT CCGGCGGCAG AATGCGGGGG ACTACGACAT TCCGGCGCTG ACGCTGAAGG CCGGGATCGC GCCGGAGAAG GCGGGGTTCG CGGCGCACCT CGCGCACGAG CAGTGA
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Protein sequence | MNVLIVYAHP EPRSLNGALR DFAVEHLEAA GHAVQVTDLY AMNWKAAFDA HDVTHRAPDA RFDPALDSKR AFETGTQRDD IAREQDKLKW ADAVILQFPL WWFSMPAIMK GWVERVYAYG FAYGVGEHSD RHWGDRYGEG SLAGKRAMVI VTTGGWESHY SARGINGPID DVLFPIQHGI LYYPGFDVLP PFVIYRTGRM NDARFDETRA ALGKRLDELW SVRPIPFRRQ NAGDYDIPAL TLKAGIAPEK AGFAAHLAHE Q
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