Gene BamMC406_3642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3642 
Symbol 
ID6180039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp587554 
End bp588339 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content66% 
IMG OID641683412 
Productribosyldihydronicotinamide dehydrogenase (quinone) 
Protein accessionYP_001810325 
Protein GI172062674 
COG category[R] General function prediction only 
COG ID[COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.750916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.729686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTGC TGATCGTCTA TGCCCATCCC GAACCGCGTT CGCTCAACGG CGCGTTGCGG 
GACTTCGCGG TCGAGCATCT CGAAGCGGCC GGCCATGCCG TGCAGGTGAC CGATCTGTAC
GCGATGAACT GGAAGGCCGC GTTCGACGCG CATGACGTGA CCCACCGTGC GCCCGACGCA
CGTTTCGATC CCGCGCTCGA TTCGAAGCGT GCGTTCGAGA CGGGCACGCA GCGCGACGAC
ATCGCGCGCG AACAGGACAA GCTGAAGTGG GCCGACGCGG TGATCCTGCA GTTTCCGCTG
TGGTGGTTCT CGATGCCGGC GATCATGAAG GGCTGGGTCG AGCGTGTGTA TGCGTACGGC
TTCGCGTACG GCGTCGGCGA GCATTCCGAC CGGCACTGGG GCGACCGTTA CGGAGAGGGC
TCGCTGGCGG GCAAGCGTGC GATGGTGATC GTCACGACGG GGGGCTGGGA GTCGCACTAC
AGTGCGCGCG GCATCAACGG GCCGATCGAC GACGTGCTGT TTCCGATCCA GCACGGCATT
TTGTATTACC CGGGGTTCGA CGTGCTGCCG CCGTTCGTGA TCTACCGGAC GGGGCGGATG
AACGACGCTC GCTTCGACGA AACGCGCGCG GCGCTCGGCA AGCGTCTCGA CGAACTGTGG
AGCGTACGGC CGATTCCGTT CCGGCGGCAG AATGCGGGGG ACTACGACAT TCCGGCGCTG
ACGCTGAAGG CCGGGATCGC GCCGGAGAAG GCGGGGTTCG CGGCGCACCT CGCGCACGAG
CAGTGA
 
Protein sequence
MNVLIVYAHP EPRSLNGALR DFAVEHLEAA GHAVQVTDLY AMNWKAAFDA HDVTHRAPDA 
RFDPALDSKR AFETGTQRDD IAREQDKLKW ADAVILQFPL WWFSMPAIMK GWVERVYAYG
FAYGVGEHSD RHWGDRYGEG SLAGKRAMVI VTTGGWESHY SARGINGPID DVLFPIQHGI
LYYPGFDVLP PFVIYRTGRM NDARFDETRA ALGKRLDELW SVRPIPFRRQ NAGDYDIPAL
TLKAGIAPEK AGFAAHLAHE Q