Gene BamMC406_3638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3638 
Symbol 
ID6179897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp582646 
End bp583728 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content69% 
IMG OID641683408 
ProductAraC family transcriptional regulator 
Protein accessionYP_001810321 
Protein GI172062670 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.632973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGTCA TTTCCGGCCA AATCGACATG ACCTCCCCGT CACGCAAGGA TCACCTCGGG 
CTCCGCCGGC CGACGATTCC GGTCGCCTAT ACGCGCCTGC TGCTGCAGGC GCTGGCCGCA
CGCGGCGTCG ATCTGGCCGC GGTGCGCGCA GGCACGGGGC TGCGCGACGC GGTGTTGGCC
GAACCGGACG CCCGCGTCGC GCCGTCGCAA TGGGGCCGGC TCGTGCTGAA CGCGATCGAG
ATCGGCGGCG ATCCGGGCAT CGGGCTCGCG TTCGGGCTGC TGCTGAAGCC GACCGTGCAC
GGCTTCCTCG GCTATGCAAC GCTGACCGCG CGGGACATCC GCGACGCGCT GATGGTCACG
CAGCGCTACT TCCGGATGCG CAATCGGCAA TATCGTCTGA CCTACGCGGA GGACGAACAC
GGCGCAACCC TCGAACTGCA CGGCGTGCAG GCGAGCCCCG TGCTGCAGCA TCACGTGATG
TTCGAGTTCG TGCTGACCGG GCTCGCGCAA AATATCTCGC AGTGGTCCGG GCGCGCATCG
CCGCCGATCG CGCTGCGCTT CGCGTGGCCG GAGCCCGGCT ATTTCGCGCG TTATCGCGAC
CAGTTGCCCC CGGTCGAATT CGGCTGCGCG GCGAATGCGC TGTGGATCGC GCGCGACGTG
CTCGACTGGC CGCTGCCGCT TGCCGACGAA GTCGCACACC GGCAGGCGCT CGTGCAGGTC
GAGCGCGAGT ATGCGCAGGT ACGCCAGGAG GAAGGCGATC TGGTCGAGCG CGTGCGCGCG
GAACTGGCGC GCACGGCCGG CGACTATTCG AGCCCGGAGG CGCTCGCCGA CGCGCTGCTC
GTGTCGACGC GCACGTTGCG GCGCCGGCTC GAGGAAGCCG GGTCGAGCTA CCGGCAACTG
CTCGACGAAG CGCGGCTTCG CGATGCGAAG CAGTTGCTCG CGGCCTCGGA TCTCGATCTG
AAGACGATCG CCGAACGGCT GCAATTCACC GACCCGGCGA ATTTCACGCG GGCGTTTCGA
CGGTGGGCCG GGCAGACGCC GAGCGCCTAT CGGGAAGCGG CGGGCGATCC GGCACGCGAG
TAA
 
Protein sequence
MLVISGQIDM TSPSRKDHLG LRRPTIPVAY TRLLLQALAA RGVDLAAVRA GTGLRDAVLA 
EPDARVAPSQ WGRLVLNAIE IGGDPGIGLA FGLLLKPTVH GFLGYATLTA RDIRDALMVT
QRYFRMRNRQ YRLTYAEDEH GATLELHGVQ ASPVLQHHVM FEFVLTGLAQ NISQWSGRAS
PPIALRFAWP EPGYFARYRD QLPPVEFGCA ANALWIARDV LDWPLPLADE VAHRQALVQV
EREYAQVRQE EGDLVERVRA ELARTAGDYS SPEALADALL VSTRTLRRRL EEAGSSYRQL
LDEARLRDAK QLLAASDLDL KTIAERLQFT DPANFTRAFR RWAGQTPSAY REAAGDPARE