Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3638 |
Symbol | |
ID | 6179897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 582646 |
End bp | 583728 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641683408 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001810321 |
Protein GI | 172062670 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.632973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGTCA TTTCCGGCCA AATCGACATG ACCTCCCCGT CACGCAAGGA TCACCTCGGG CTCCGCCGGC CGACGATTCC GGTCGCCTAT ACGCGCCTGC TGCTGCAGGC GCTGGCCGCA CGCGGCGTCG ATCTGGCCGC GGTGCGCGCA GGCACGGGGC TGCGCGACGC GGTGTTGGCC GAACCGGACG CCCGCGTCGC GCCGTCGCAA TGGGGCCGGC TCGTGCTGAA CGCGATCGAG ATCGGCGGCG ATCCGGGCAT CGGGCTCGCG TTCGGGCTGC TGCTGAAGCC GACCGTGCAC GGCTTCCTCG GCTATGCAAC GCTGACCGCG CGGGACATCC GCGACGCGCT GATGGTCACG CAGCGCTACT TCCGGATGCG CAATCGGCAA TATCGTCTGA CCTACGCGGA GGACGAACAC GGCGCAACCC TCGAACTGCA CGGCGTGCAG GCGAGCCCCG TGCTGCAGCA TCACGTGATG TTCGAGTTCG TGCTGACCGG GCTCGCGCAA AATATCTCGC AGTGGTCCGG GCGCGCATCG CCGCCGATCG CGCTGCGCTT CGCGTGGCCG GAGCCCGGCT ATTTCGCGCG TTATCGCGAC CAGTTGCCCC CGGTCGAATT CGGCTGCGCG GCGAATGCGC TGTGGATCGC GCGCGACGTG CTCGACTGGC CGCTGCCGCT TGCCGACGAA GTCGCACACC GGCAGGCGCT CGTGCAGGTC GAGCGCGAGT ATGCGCAGGT ACGCCAGGAG GAAGGCGATC TGGTCGAGCG CGTGCGCGCG GAACTGGCGC GCACGGCCGG CGACTATTCG AGCCCGGAGG CGCTCGCCGA CGCGCTGCTC GTGTCGACGC GCACGTTGCG GCGCCGGCTC GAGGAAGCCG GGTCGAGCTA CCGGCAACTG CTCGACGAAG CGCGGCTTCG CGATGCGAAG CAGTTGCTCG CGGCCTCGGA TCTCGATCTG AAGACGATCG CCGAACGGCT GCAATTCACC GACCCGGCGA ATTTCACGCG GGCGTTTCGA CGGTGGGCCG GGCAGACGCC GAGCGCCTAT CGGGAAGCGG CGGGCGATCC GGCACGCGAG TAA
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Protein sequence | MLVISGQIDM TSPSRKDHLG LRRPTIPVAY TRLLLQALAA RGVDLAAVRA GTGLRDAVLA EPDARVAPSQ WGRLVLNAIE IGGDPGIGLA FGLLLKPTVH GFLGYATLTA RDIRDALMVT QRYFRMRNRQ YRLTYAEDEH GATLELHGVQ ASPVLQHHVM FEFVLTGLAQ NISQWSGRAS PPIALRFAWP EPGYFARYRD QLPPVEFGCA ANALWIARDV LDWPLPLADE VAHRQALVQV EREYAQVRQE EGDLVERVRA ELARTAGDYS SPEALADALL VSTRTLRRRL EEAGSSYRQL LDEARLRDAK QLLAASDLDL KTIAERLQFT DPANFTRAFR RWAGQTPSAY REAAGDPARE
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