| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3529 |
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| Symbol | |
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| ID | 6179118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 458789 |
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| End bp | 459919 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641683298 |
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| Product | porin |
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| Protein accession | YP_001810212 |
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| Protein GI | 172062561 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.327335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCATC CGAACGGGCG GGCCGACCGG CTTGCCGTAC CGCGTGCCGC GCTGGTTGCC
GCGCTTCTCA CGTGCGCGTC GCTGCCGGCG CTCGCGCAAT CGAGCGTGAC GCTCTACGGC
CGCGTCGACA CCGCGATCGA ATACGCGAAC GCCGGGCCGA ATCATGTGAC GCGCGTGGGC
AGCGGCAACC TGTGGGCGTC GCAGTGGGGG TTGAAGGGCG TCGAGGATCT CGGTGGCGGT
TACGCGGCGA TCTTCAAGCT CGAGGACGGC TTCAACGCGG CGAGCGGCGC GCTGTCGAAC
AGCAGCGCGC TGTTCGGCCG CGAGGCGTGG GTCGGCATCA CCGGGCCGTT CGGCGGCGTG
CAGTTCGGCG AGCTCTACAC GATCCTGCAC ACCACGCTCG TCACGTACAG CCTGCCCGGT
CTCGGCGCGG GCCTCGCGTG GGGCAACGCG ACGAACAACT TCGTCGGGCC CGCGTTCCTG
CGCGTGCGCA ACTCGATGCG CTACACGTCG CCGCGCTACG CCGGCTTCAT GCTCCGCGCG
ATGGCCGCGC GCGGCGCCAA TGGCGCGGCC GGCCAGCCGG CGACGCTCGG CGACACGTAC
GGCGCGGGCC TCAACTACGC GCGCGGCGGG TTGTCGATCG ACGTCGACTA CATGCAGCAG
AAGTTCAGCC CGGTCGCCGC ATCCGCGCTC GGTGCCACGA GCCCGGCCGC GAACGGCAAC
TACACGCTCG GCGCGATCTC GTACGACTTC AGCGTCGTGA AGATCGCCGC GTTGTACATG
CGCCATCGCG GCGGCCCCGA CGTCGCGGCC GCGATCGACA GCCAGAGTGC GTATCCGCAC
AGCGACACGA TGGAGCTCAG CGCGACGGTG CCGATCGGCC GCGCGTCGCT GCTGTTGAGC
ATCGGCCACT ACCGGAAGGT CGCGGACAGC GACGGCAACG CCGATTCGTA CGGCATCCGC
TTCGACTATC CGCTGTCGAA GCGCACGGTG CTTTACACGG GCGCGGCGAT GGTGCGCAAC
GGCGCGCATG CGCGCTTCGT CGTGAACGGC GCGGCGGGCG GCGGCGTCGC GGTCGCGAAA
CCCGGCGCGA CCGCCAGCTC GATCGTCGCG GGCATCCTCA CGTCGTTCTG A
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| Protein sequence | MNHPNGRADR LAVPRAALVA ALLTCASLPA LAQSSVTLYG RVDTAIEYAN AGPNHVTRVG
SGNLWASQWG LKGVEDLGGG YAAIFKLEDG FNAASGALSN SSALFGREAW VGITGPFGGV
QFGELYTILH TTLVTYSLPG LGAGLAWGNA TNNFVGPAFL RVRNSMRYTS PRYAGFMLRA
MAARGANGAA GQPATLGDTY GAGLNYARGG LSIDVDYMQQ KFSPVAASAL GATSPAANGN
YTLGAISYDF SVVKIAALYM RHRGGPDVAA AIDSQSAYPH SDTMELSATV PIGRASLLLS
IGHYRKVADS DGNADSYGIR FDYPLSKRTV LYTGAAMVRN GAHARFVVNG AAGGGVAVAK
PGATASSIVA GILTSF
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