Gene BamMC406_3502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3502 
Symbol 
ID6180575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp433147 
End bp433476 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content71% 
IMG OID641683271 
Productputative transcriptional regulator 
Protein accessionYP_001810185 
Protein GI172062534 
COG category[K] Transcription 
COG ID[COG3636] Predicted transcriptional regulator 
TIGRFAM ID[TIGR02684] probable addiction module antidote protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.387037 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00960025 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAACAAGC TCAAAGGCGC GGTCTCGCAC CACGACGCGG AAGTCGCCGA ACTCGGTGCC 
GACCGCGAGC TGGCGGTGGC CTATCTGCGC GTCGCGATGG AGTCGCTCGA CGATCCCGAC
AACCGCGCGG CCGCGCTGCT CGCGCTGCGC ACGGTCGCGG AAGCGTACGG CGGGCTCGGC
GCGGTCGCGG CCGAAGCCGG GATCAGCCGC GAATCGCTGT ATCGCACGCT GTCGCCCAAC
GGCAACCCGA CGCTGAAAAC CCTGCTCGCG GTGCTCAAGA CGGTCGGCTT GCGCCTGTCC
GTCGTCCCCG CGCAACCGGC GCACGCCTGA
 
Protein sequence
MNKLKGAVSH HDAEVAELGA DRELAVAYLR VAMESLDDPD NRAAALLALR TVAEAYGGLG 
AVAAEAGISR ESLYRTLSPN GNPTLKTLLA VLKTVGLRLS VVPAQPAHA