Gene BamMC406_3488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3488 
Symbol 
ID6180368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp414760 
End bp415350 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content75% 
IMG OID641683257 
Producthypothetical protein 
Protein accessionYP_001810171 
Protein GI172062520 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00401228 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCCGAAA CCAACCTGTC CTTCTTCGGC CGGCTGTCGC TGGCCGTCGG CACGTTCTTC 
TCCGTGCTCG GCAACCGCGA GTTCGCGGCC GGCGTGCTGC GCCTGCGCGA CGGCGCGCCG
GCACCGGTCG CCCCGGCGCC GGTCGCGCCG ACCCCCGCCG CGGCGCCGGC ACCCGCGCCC
GTGAAGGCGC CGGCGCCCGA GCTGCGCGAA GCGAGCCCGC AAGCCGCGCT GCAACTGCTC
GGCCTGCTGC AGCGCGATGC GCGCTTCATC GACTTCGTCG AGGAAGACAT CGCCGGCTAC
GCGGACGCCG ACATCGGCGC CGCCGCCCGC CTCGTGCACG ACGGCTGCCG TGCCGCGCTG
CGCGAACACT TCACGATCGT GCCGGTGCGC GATGAAGCCG AGGGCAGCCG CGTGACGCTG
CCGGCCGGCT TCGATGCGAC GGCCGTGCGC GTGACGGGGA ACGTGGTCGG CGCGGCGCCG
TTCACGGGCA CGGTCAGCCA TCGCGGCTGG CGCGTGGCCG ACGTGCGCCT GCCGAAGCTG
ACGGGCAGCC ACGACGCATC GGTGGTCGCA CCGGCGGAGG TGGAACTGTG A
 
Protein sequence
MPETNLSFFG RLSLAVGTFF SVLGNREFAA GVLRLRDGAP APVAPAPVAP TPAAAPAPAP 
VKAPAPELRE ASPQAALQLL GLLQRDARFI DFVEEDIAGY ADADIGAAAR LVHDGCRAAL
REHFTIVPVR DEAEGSRVTL PAGFDATAVR VTGNVVGAAP FTGTVSHRGW RVADVRLPKL
TGSHDASVVA PAEVEL