Gene BamMC406_3474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3474 
Symbol 
ID6180813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp396133 
End bp397188 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content70% 
IMG OID641683243 
Productsaccharopine dehydrogenase 
Protein accessionYP_001810157 
Protein GI172062506 
COG category[S] Function unknown 
COG ID[COG3268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.103531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGTC GAATGACGGT TGCAGTGTAT GGCGCCACCG GTCACACCGG GCGGTTTGTC 
GTCGCCGAAC TGGAACGGCG CGGCCTCGGC GTGATGCGCA TCGGGCGCGA TGCCGCGCGG
CTCGCACAAG GCGGCACCGA CGTGGCGCCG TGGCGCGTCG CGTCGGTCGA CGATCCGGCC
GCGCTCGACA CCGCCTTGCG CGGCGCGCAC GCGGTGATCA ACTGCGCGGG CCCCTACCTC
GATACCGCGC TGCCGCTCGC CGACGCGGCG TTGCGCGCCG GTATCACGTA TCTCGATCTG
ACGGCCGAGC AGCCGTCCAT CCAGACGCTG ACCGACCAGC GCGACGCCCG CGCACGCGCC
GTCGGCGTGA CGCTGGTGCC GGCCGCCGCG TTCTACGGCG GTCTGGCCGA CCTGCTCGTG
ACGGCCGTGG TCGACCCGCA GCGGCCGATC GAGCGCGTCG ACGTCGCGAC CGGCCTCGAC
AGCTGGCATC CGACGCGCGG CACGCGCGTG ACCGGCGAGC GCAATCACGC GACCCGGCTG
ATGCAGAAGG ACGGCAAGCC GACCGCGGTG CCGACGACGG CACGCGAGCG CCGCTGGCCG
TTTCCGTCAC CGCTCGGCGA CGTCGACGTG ACATTGCTGC CGTTCTCGGA AGTGATGACG
CTCGCACGTC ATCTGCGCAT CGATACGATC GAGTCCTGGC TGGCGACGCT CGCGCTGCGC
GATCTCCGCG ATGCCGGCAC GCCGCCGCCG CAACCGGTCG ACGCGCTCGG CCGCTCGGCG
CAGCAATTCG TGATGGACGC CGTCGTCGTG CAGCACGGCA TCACGCATCG CGCGAGCGCG
TCGGGACGCG ACATCTATGC GGTCAGCGCG CCGCTCATCG TCGAGGCGAC GGTCCGCCTG
CTGAGCGGCC GTACACTGAC GTCGGGCGGC GTACGCAGCC TCGGCGAACT GTTCGACGCG
CGCGATTTCC TCGCGGCGCT CGACACCATC GACGTATCGT TCGATACGAT CACCGATCGG
CATTTCAACC GGAGGGACGA GCATGAGTCG CAATAA
 
Protein sequence
MDGRMTVAVY GATGHTGRFV VAELERRGLG VMRIGRDAAR LAQGGTDVAP WRVASVDDPA 
ALDTALRGAH AVINCAGPYL DTALPLADAA LRAGITYLDL TAEQPSIQTL TDQRDARARA
VGVTLVPAAA FYGGLADLLV TAVVDPQRPI ERVDVATGLD SWHPTRGTRV TGERNHATRL
MQKDGKPTAV PTTARERRWP FPSPLGDVDV TLLPFSEVMT LARHLRIDTI ESWLATLALR
DLRDAGTPPP QPVDALGRSA QQFVMDAVVV QHGITHRASA SGRDIYAVSA PLIVEATVRL
LSGRTLTSGG VRSLGELFDA RDFLAALDTI DVSFDTITDR HFNRRDEHES Q