Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3474 |
Symbol | |
ID | 6180813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 396133 |
End bp | 397188 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641683243 |
Product | saccharopine dehydrogenase |
Protein accession | YP_001810157 |
Protein GI | 172062506 |
COG category | [S] Function unknown |
COG ID | [COG3268] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.103531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGGTC GAATGACGGT TGCAGTGTAT GGCGCCACCG GTCACACCGG GCGGTTTGTC GTCGCCGAAC TGGAACGGCG CGGCCTCGGC GTGATGCGCA TCGGGCGCGA TGCCGCGCGG CTCGCACAAG GCGGCACCGA CGTGGCGCCG TGGCGCGTCG CGTCGGTCGA CGATCCGGCC GCGCTCGACA CCGCCTTGCG CGGCGCGCAC GCGGTGATCA ACTGCGCGGG CCCCTACCTC GATACCGCGC TGCCGCTCGC CGACGCGGCG TTGCGCGCCG GTATCACGTA TCTCGATCTG ACGGCCGAGC AGCCGTCCAT CCAGACGCTG ACCGACCAGC GCGACGCCCG CGCACGCGCC GTCGGCGTGA CGCTGGTGCC GGCCGCCGCG TTCTACGGCG GTCTGGCCGA CCTGCTCGTG ACGGCCGTGG TCGACCCGCA GCGGCCGATC GAGCGCGTCG ACGTCGCGAC CGGCCTCGAC AGCTGGCATC CGACGCGCGG CACGCGCGTG ACCGGCGAGC GCAATCACGC GACCCGGCTG ATGCAGAAGG ACGGCAAGCC GACCGCGGTG CCGACGACGG CACGCGAGCG CCGCTGGCCG TTTCCGTCAC CGCTCGGCGA CGTCGACGTG ACATTGCTGC CGTTCTCGGA AGTGATGACG CTCGCACGTC ATCTGCGCAT CGATACGATC GAGTCCTGGC TGGCGACGCT CGCGCTGCGC GATCTCCGCG ATGCCGGCAC GCCGCCGCCG CAACCGGTCG ACGCGCTCGG CCGCTCGGCG CAGCAATTCG TGATGGACGC CGTCGTCGTG CAGCACGGCA TCACGCATCG CGCGAGCGCG TCGGGACGCG ACATCTATGC GGTCAGCGCG CCGCTCATCG TCGAGGCGAC GGTCCGCCTG CTGAGCGGCC GTACACTGAC GTCGGGCGGC GTACGCAGCC TCGGCGAACT GTTCGACGCG CGCGATTTCC TCGCGGCGCT CGACACCATC GACGTATCGT TCGATACGAT CACCGATCGG CATTTCAACC GGAGGGACGA GCATGAGTCG CAATAA
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Protein sequence | MDGRMTVAVY GATGHTGRFV VAELERRGLG VMRIGRDAAR LAQGGTDVAP WRVASVDDPA ALDTALRGAH AVINCAGPYL DTALPLADAA LRAGITYLDL TAEQPSIQTL TDQRDARARA VGVTLVPAAA FYGGLADLLV TAVVDPQRPI ERVDVATGLD SWHPTRGTRV TGERNHATRL MQKDGKPTAV PTTARERRWP FPSPLGDVDV TLLPFSEVMT LARHLRIDTI ESWLATLALR DLRDAGTPPP QPVDALGRSA QQFVMDAVVV QHGITHRASA SGRDIYAVSA PLIVEATVRL LSGRTLTSGG VRSLGELFDA RDFLAALDTI DVSFDTITDR HFNRRDEHES Q
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