Gene BamMC406_3473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3473 
Symbol 
ID6180812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp395379 
End bp396146 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content70% 
IMG OID641683242 
ProductPEP phosphonomutase 
Protein accessionYP_001810156 
Protein GI172062505 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0613154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGCA ATAACAAGGA AAAAGCCGCG TATTTCCGTT CGCTTCATCG CGCGGGCGAG 
CCGCTCGCGC TGTTCAACGT GTGGGACGCG GGCAGCGCAC GCACGGTGGC CGAGGCGGGT
GGCGTCGCGC TGGCGACGGG CAGCTGGTCG GTCGCGGTCG CCAACGGGTT CGCCGACGGC
GAGCAGATGC CGAAAGCGCT CGTGATGGAA GTGCTCGCGC GGATCGCGCA AGCGACCGAC
CTGCCCGTCA CCGTCGATCT CGAAAGCGGG TACGGCGAGC GGCTGGAGGA CGTGGCCGAC
ACGATCGCGC GCAGCATCGA GGCCGGCGCG ATCGGCTGCA ATCTGGAAGA CAGCTTTCCG
GCGACGGGCG AACTGCGTAC CGTCGACGAC GCGGCCGCGC GTCTTGCGGC AGCCCGGCAG
GCGGCCGATC GCGCGGACAT CGGCTACTTC ATCAACGCGC GCACCGACGT GTTCTTCAAG
GCCGCGGCCG ACACGCATGA CGAACGGCTT CTGGACGACG TGCTGACCCG CGCACGCGCG
TACGCGGCGG CGGGCGCCGA CGGCCTGTTC GTGCCGGGCC TGCGCTCGCC GGCGCTGATT
CGCGCGCTGA CGGCCGCGTC GCCGTTGCCC GTGAACATCA TGCGCGTGGC CGAAACGCCG
ACGCTCGCCG AACTCGCGGA ATACGGCGTC GCGCGCATCA GTCACGGGCC CTACCCTTAC
CTGGAGGCGA TGAAGGCGCT TGCGGCGGTG GTGAAGCAAG GCGGCTAG
 
Protein sequence
MSRNNKEKAA YFRSLHRAGE PLALFNVWDA GSARTVAEAG GVALATGSWS VAVANGFADG 
EQMPKALVME VLARIAQATD LPVTVDLESG YGERLEDVAD TIARSIEAGA IGCNLEDSFP
ATGELRTVDD AAARLAAARQ AADRADIGYF INARTDVFFK AAADTHDERL LDDVLTRARA
YAAAGADGLF VPGLRSPALI RALTAASPLP VNIMRVAETP TLAELAEYGV ARISHGPYPY
LEAMKALAAV VKQGG