Gene BamMC406_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3400 
Symbol 
ID6180431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp322767 
End bp324059 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content68% 
IMG OID641683169 
Productmajor facilitator transporter 
Protein accessionYP_001810083 
Protein GI172062432 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCTG CCGTCGTCGG TGCGGTGCGC GCCGCCGCCA GCCGCTACCG CTGGACCGTC 
TGTGCGCTGC TGTTCTTCGC GACCGTCATC AACTACATGG ATCGCCAGAT CCTCGGCCTG
CTCGCGCCGA TGCTCCAGCA CGACATCGGC TGGAGCCAGG TGCAGTACGG TCGCATCGTG
ATGGCGTTTT CCGCGTTCTA CGCGATCGGC CTGCTTTGCT TCGGTCGCAT CGTCGACTGG
CTCGGCACGC GCATCTCGTA TGCGGTCGCG ATGCTGGTGT GGAGCATCGC GGCGATGATG
CACGCGATGG TCGGCTCGGT GATGGGCTTC GCGGCGGTGC GCGCGTTGCT CGGGATCGGC
GAGGGCGGCA ACTTCCCGGC CGCGATCAAG ACCACGGCCG AATGGTTTCC GCGCCGCGAA
CGCGCGCTCG CAACCGGGAT CTTCAACTCG GGCGCGAACA TCGGCGCGGT GTTCGCGCCT
GCGATCATCC CGGCGATCGC GGTGGCCTAC GGGTGGCGGG CGGCGTTCGT GATCGTCGGC
GCAATCGGCA TCGTGTGGCT CGCGGTGTGG CTGGTGCTCT ATCGCACGGC CGACACGCGC
GCGCTCGCCG ACGCCTACGA CGAGCCGCGC GACGAAGCCG AAGCGCTCGA CGCGGCGAAC
GTGAACGCCG GCGCGCCGCG CTGGGGCGAA CTGATCCGCA AGCGCGAGAC GTGGGCGTTC
CTGATCGGCA AGTTCCTGAC CGACCCGGTG TGGTGGTTCT ATCTGTTCTG GCTGCCGAAG
TGGCTCAACG AGTCGCGCGG GATGGACATG CAGCATATCG GCCTGCCGCT CGTGTGCATC
TATGCGCTGA CGACGGTCGG CAGCATCGGC GGCGGCTGGC TGTCGTCGGC GTTGCTGCGC
GCGGGCTGGA GCGTCAACGG CGCGCGCAAG ACGGCGATGC TGATCTGCGC ATGCTGCGTG
CTGCCGATCG CGTTCGTGTC GCAGGTGCAG AACCTGTGGA TCGCGGTGCT GATCGTCGGC
CTCGCCGCGG CCGCGCACCA GGGCTGGTCG GCGAACCTGT TCACGACGGC GTCCGACCTG
TTCCCGCGAC GTGCGGTCGC GTCGGTGGTC GGCATCGGCG GGATGGCCGG CTCGATCGGC
GGCGTGCTGT TCTCGGAAGT GATCGGCCAG GTGCTGCAAC GCACGGGCCA CTACTGGGTG
CTGTTCGCGA TCGGCGCGCT CGCCTACCTG CTCGCGCTGG CGGTCATGCA CGTGCTCACG
CCGAAGATGA AGCCCGCGAA GCTCGACGCG TGA
 
Protein sequence
MQSAVVGAVR AAASRYRWTV CALLFFATVI NYMDRQILGL LAPMLQHDIG WSQVQYGRIV 
MAFSAFYAIG LLCFGRIVDW LGTRISYAVA MLVWSIAAMM HAMVGSVMGF AAVRALLGIG
EGGNFPAAIK TTAEWFPRRE RALATGIFNS GANIGAVFAP AIIPAIAVAY GWRAAFVIVG
AIGIVWLAVW LVLYRTADTR ALADAYDEPR DEAEALDAAN VNAGAPRWGE LIRKRETWAF
LIGKFLTDPV WWFYLFWLPK WLNESRGMDM QHIGLPLVCI YALTTVGSIG GGWLSSALLR
AGWSVNGARK TAMLICACCV LPIAFVSQVQ NLWIAVLIVG LAAAAHQGWS ANLFTTASDL
FPRRAVASVV GIGGMAGSIG GVLFSEVIGQ VLQRTGHYWV LFAIGALAYL LALAVMHVLT
PKMKPAKLDA