| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3363 |
|---|
| Symbol | glyA |
|---|
| ID | 6179171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 274832 |
|---|
| End bp | 276079 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641683132 |
|---|
| Product | serine hydroxymethyltransferase |
|---|
| Protein accession | YP_001810046 |
|---|
| Protein GI | 172062395 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAATC GCACTACCAG CACCGTCGCC AACGTCGATC CCGAACTCTG GACTGCCATT
CAGGACGAGA ACCGCCGCCA GGAAGATCAC ATCGAGCTGA TCGCGTCGGA AAACTACACG
AGCCCGGCCG TGATGGCCGC CCAGGGCTCG CAGCTCACGA ACAAGTACGC GGAAGGTTAT
CCGGGCAAGC GCTACTACGG CGGCTGTGAA TACGTCGACG TGGTCGAGCA GCTGGCGATC
GACCGTGTGA AGCAGCTGTT CGGCGCGGAA GCCGCGAACG TGCAGCCGAA CTCGGGTTCG
CAGGCGAACC AGGGCGTGTT CTTCGCGATG CTCAAGCCGG GCGACACGAT CATGGGCATG
AGCCTGGCGC ACGGCGGTCA CCTGACGCAC GGCTCGCCGG TGAACATGTC GGGCAAGTGG
TTCAACGTGG TGAGCTACGG TCTGAACGAG CAGGAAGACA TCGACTACGA CGCGGCCGAG
CAGCTCGCGC AGGAACACAA GCCGAAGCTG ATCGTCGCGG GCGCGTCGGC GTTCGCGCTG
AAGATCGACT TCGAGCGTCT GGCGAAGATC GCGAAGTCGG TGGGTGCGTA CCTGATGGTC
GACATGGCGC ACTACGCGGG CCTGATCGCG GCGGGCGTGT ATCCGAACCC GGTGCCGCAT
GCGGACTTCG TGACGACGAC GACGCACAAG AGCCTGCGCG GCCCGCGCGG CGGCGTGATC
CTGATGAAGG CCGAGTACGA GAAGCCGATC AACTCGGCGA TCTTCCCGGG CATCCAGGGT
GGGCCGCTGA TGCACGTGAT CGCGGCGAAG GCCGTGGCGT TCAAGGAAGC GCTGTCGCCG
GAATTCAAGG CGTACCAGGA AAAGGTGGTC GAGAACGCGC GCGTGCTGGC AGAAACGCTG
GTCAAGCGCG GGCTGCGAAT CGTGTCGGGC CGCACCGAAA GCCACGTGAT GCTGGTGGAC
CTGCGCGCGA AGAACATCAC CGGCAAGGCG GCGGAGGCGG CGCTGGGTGC TGCGCACATC
ACGGTGAACA AGAACGCGAT CCCGAACGAT CCGGAAAAGC CGTTCGTGAC GAGCGGCATC
CGTCTGGGTT CGCCGGCGAT GACGACGCGC GGCTTCGGCC CGGCGGAAGC CGAGCTGGTC
GGCAACCTGA TTGCGGACGT GCTGGAAGCG CCGGAAGATG CGGCGACGAT CGAGCGCGTG
CGCGGGCGCG TCGCGGAGTT GACGCAGCGT TTCCCCGTCT ACGGCTGA
|
|---|
| Protein sequence | MFNRTTSTVA NVDPELWTAI QDENRRQEDH IELIASENYT SPAVMAAQGS QLTNKYAEGY
PGKRYYGGCE YVDVVEQLAI DRVKQLFGAE AANVQPNSGS QANQGVFFAM LKPGDTIMGM
SLAHGGHLTH GSPVNMSGKW FNVVSYGLNE QEDIDYDAAE QLAQEHKPKL IVAGASAFAL
KIDFERLAKI AKSVGAYLMV DMAHYAGLIA AGVYPNPVPH ADFVTTTTHK SLRGPRGGVI
LMKAEYEKPI NSAIFPGIQG GPLMHVIAAK AVAFKEALSP EFKAYQEKVV ENARVLAETL
VKRGLRIVSG RTESHVMLVD LRAKNITGKA AEAALGAAHI TVNKNAIPND PEKPFVTSGI
RLGSPAMTTR GFGPAEAELV GNLIADVLEA PEDAATIERV RGRVAELTQR FPVYG
|
|---|
| |