| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3345 |
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| Symbol | |
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| ID | 6180730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 253061 |
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| End bp | 256267 |
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| Gene Length | 3207 bp |
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| Protein Length | 1068 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641683114 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001810028 |
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| Protein GI | 172062377 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCGC ACGTGATTCG CTGGTCCGTC CACAACCGCT TTCTGGTGCT GCTCGCGACC
GTTCTGCTCG CGGCGTGGGG TGTCCATTCG CTGCGGCAGA CGCCGCTCGA CGCGCTGCCC
GACCTGTCGG ACACGCAGGT CATCGTCAAG GCGTCGTACC CGGGCAAGGC GCCGCAGATC
GTCGAGGACC AGGTGACCTA CCCGCTGACG ACGACGCTGC TCGGCGTGCC GGGTGCGAAA
ACCGTCCGCG CGTACTCGTC GTTCGGCGAT GCGTTCGTCT ACGTATTGTT CGACGACCAT
ACCGACCCGT ACTGGGCACG TTCGCGCGTG CTCGAATACC TGAGCCAGGT GCAGAGCCGG
CTGCCCGCGG GCGCGACCGT GTCGCTCGGG CCGGACGCGA CCGGGGTCGG GTGGGTGTAC
GAGTACGCGC TTGTCGACCG CACCGGCCGC CACGACCCCG GCCAACTGCG CGCGCTCAAC
GACTGGTTCC TGAAATTCGA GCTGAAGGCG GTGCCGGACG TGTCCGAAGT CGCGAGCATC
GGGGGGATGG TGCGCCAGTA CCAGATCGTG CTCGATCCGG ACAAGCTGCG TGCGTACGGC
ATCACCCAGG CGGCGGTCGC GGACGCGCTC GGCAAGGCGA ACCAGGCATC GGGCGGCTCG
GTCGTCGAGC TGGCCGAGTC GGAGTACATG GTGCGTTCGT CCGGCTACCT GCGCACGCTC
GACGACTTCC GGCACGTCGT GCTGCGCACC GACGACGCGG GCACGCCGGT GCTGCTCGGC
GACGTCGCGC GCATCCAGGT CGGCCCCGCG ATGCGGCGCG GGATCGCGGA ACTGAACGGC
CAGGGCGAGG TGACGGGCGG CGTCCTCGTG ATGCGCTCGG GCAAGAATGC GCTGACGACA
ATCGACGCGG TGAAGGCGAA GCTCGCCGCG CTGAAGCGCT CGCTGCCGCC CGGCGTCGAG
ATCGTCACGA CCTACGATCG TTCGCAGCTG ATCGAGCGCG CGGTGGACAA CCTCAGGGAC
AAGCTGATCG AGGAGTTCGT GATCGTCGGG ATCGTCTGTG CGGTCTTCCT GTTCCATCTG
CGCAGCGCGT TGGTCGCGAT CCTGGCGCTG CCGCTCGGCG TACTGACGGC GTTCATCGTG
ATGCGTTACC AGGGCGTGAA TGCGAATCTG ATGTCGCTGG GCGGCATCGC GATCGCGATC
GGCGCAATGA TCGACGCGGC GATCGTGATG ATCGAGAACG CGCACAAGCA TCTGGAGGCC
TACGGCGATG CGCATCCCGG CGAGCCGATC ACGACCGCAC GCCGATGGGA GTTGGTCGCG
ACGTCGGCCG CCGAGGTCGG GCCGGCGCTG TTCTTCTCGC TGCTGATCAT CACGCTGTCG
TTCATTCCGG TGTTTTCGCT CGAAGGGCAG GAGGGCAAGC TGTTCGCGCC GCTCGCGTTC
ACGAAGACCT ACACGATCGC CGCCGCGGCC GGTCTGTCGG TGACGCTGGT GCCGGTGCTG
ATGGGATATC TCGTGCGCGG CCGCATTCCG CCCGAGCACG CGAACCCGAT CAATCGCGTG
CTGATCCGCG TGTACCGGCC GCTGCTCGAA GCGACGCTGC GGCGCCCGTG GTTCGCAATC
GGTATTGCCG TCGTCGCGCT GTTGCTGACG GCCCTGCCGG TGTCGCGGCT CGGCGGCGAG
TTCATGCCGC CGCTCGACGA GGGCGATCTG CTGTATATGC CGACCGCATT GCCGGGCATT
TCGGCCGACA AGGCGAGCGA GCTGCTGCAG CAGACCGACC GGCTGATCAA GACCGTGCCC
GAGGTCGATA CGGTGTTCGG CAAGTCGGGG CGCGCGGATA CGGCGACCGA TCCCGCGCCG
CTCGAGATGT TCGAAACGAC GATCCGTTTC AAGCCCCGCA GCGCGTGGCG GCCTGGGATG
ACGCCCGGGA AGCTCGTCGA CGCGCTCGAT CGCACGGTGA AGGTGCCGGG GCTGTCGAAC
GTGTGGGTGC CGCCGATCCG GAACCGGCTG GACATGTTGT CCACCGGCAT CAAGACGCCC
GTCGGCGTGA AGATCTCCGG GCCGGACCTG GCGGGGATCG ACGCGATCGC GACGCAGGTC
GAGGCGGTGG TGAAGCACGT GCCGGGCGTC ACGTCCGCGC TCGCGGAACG GCTCAACGGC
GGCCGCTACA TCGACGTCGA CATCGACCGG CTCGCGGCCG CGCGCTACGG GCTGTCGGTG
GCCGATATCC AGTCGGTCGT GTCGTCGGCG ATCGGCGGCG AGGACGTCGG CGAGGTGATT
GCCGGGCGCG AGCGATTTCC GATCAACATC CGCTATCCGC GCGAGATTCG CGATTCGCTC
GAGAACCTGC GACAGTTGCC GGTCGTCACC GCGCGGGGCG CGCAGCTTCG TCTCGGCGAC
GTTGCACGCG TCGTGATCGC CGACGGGCCG CCGATGATCC GCAGCGAGAA TGCGCGGCTA
TCCGGCTACG TGTACGTCGA CATTCGCGAC ACCGATCTGC GCACCGCGGT TCGCGCGATG
CAGCAGGCGG TCGCGCAGCA GGTCACGTTG CCGCCCGGCT ATTCGATCGC ATGGTCGGGC
CAGTTCGAAT ATCTCGAACG CGCGGCGGCA ACGCTGCGCA CCGTGGTGCC GGTGACGCTC
GCCGTGATCT TCGTGCTGCT GTTCCTCACG TTCGGTTCGG CAGCCGATGC GCTGCTGCTG
ATGTCGACAG TGCCGTTCGC GCTGGTCGGC GGCTTCTGGC TCGTCTGGGC GCTCGGCCAC
GCGGTATCGG TCGCGACGTC GGTGGGCTTC ATCGCGCTGA CGGGCGTGGC CGCCGAGTTC
GGCGTGGTGA TGCTGCTGTA CCTGGAGGGC GCGCTGCGGC GCCGTCTCGA TGCCGGTGAG
CCGCTGACCG ATGCCGTGCT GCTCGATGCG GTTCGCGAAG GCGCGGTGCT GCGCGTGCGG
CCGAAGGCGA TGACGGTGGC CGTCGTGCTT GCCGGCCTCG TGCCCATCAT GATCGGACAC
GGCGCCGGCT CCGAAGTGAT GCAGCGCATC GCCGCGCCGA TGGTCGGCGG CATGGTCACC
GCGCCGCTGC TGTCGATGTT CGTCATTCCC GCCGCATGGC TTTTGCGGCA GCGCCGTCGG
GCGCGCGGCG CGAGCCGCCG GCGGCATTCC GATGCAGTTC CTCACGGCAT GAACGTGCCG
TCCAACCCCA CTGGAGAATC ACGATGA
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| Protein sequence | MIAHVIRWSV HNRFLVLLAT VLLAAWGVHS LRQTPLDALP DLSDTQVIVK ASYPGKAPQI
VEDQVTYPLT TTLLGVPGAK TVRAYSSFGD AFVYVLFDDH TDPYWARSRV LEYLSQVQSR
LPAGATVSLG PDATGVGWVY EYALVDRTGR HDPGQLRALN DWFLKFELKA VPDVSEVASI
GGMVRQYQIV LDPDKLRAYG ITQAAVADAL GKANQASGGS VVELAESEYM VRSSGYLRTL
DDFRHVVLRT DDAGTPVLLG DVARIQVGPA MRRGIAELNG QGEVTGGVLV MRSGKNALTT
IDAVKAKLAA LKRSLPPGVE IVTTYDRSQL IERAVDNLRD KLIEEFVIVG IVCAVFLFHL
RSALVAILAL PLGVLTAFIV MRYQGVNANL MSLGGIAIAI GAMIDAAIVM IENAHKHLEA
YGDAHPGEPI TTARRWELVA TSAAEVGPAL FFSLLIITLS FIPVFSLEGQ EGKLFAPLAF
TKTYTIAAAA GLSVTLVPVL MGYLVRGRIP PEHANPINRV LIRVYRPLLE ATLRRPWFAI
GIAVVALLLT ALPVSRLGGE FMPPLDEGDL LYMPTALPGI SADKASELLQ QTDRLIKTVP
EVDTVFGKSG RADTATDPAP LEMFETTIRF KPRSAWRPGM TPGKLVDALD RTVKVPGLSN
VWVPPIRNRL DMLSTGIKTP VGVKISGPDL AGIDAIATQV EAVVKHVPGV TSALAERLNG
GRYIDVDIDR LAAARYGLSV ADIQSVVSSA IGGEDVGEVI AGRERFPINI RYPREIRDSL
ENLRQLPVVT ARGAQLRLGD VARVVIADGP PMIRSENARL SGYVYVDIRD TDLRTAVRAM
QQAVAQQVTL PPGYSIAWSG QFEYLERAAA TLRTVVPVTL AVIFVLLFLT FGSAADALLL
MSTVPFALVG GFWLVWALGH AVSVATSVGF IALTGVAAEF GVVMLLYLEG ALRRRLDAGE
PLTDAVLLDA VREGAVLRVR PKAMTVAVVL AGLVPIMIGH GAGSEVMQRI AAPMVGGMVT
APLLSMFVIP AAWLLRQRRR ARGASRRRHS DAVPHGMNVP SNPTGESR
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