| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3283 |
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| Symbol | |
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| ID | 6179177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 186121 |
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| End bp | 187878 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641683057 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_001809971 |
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| Protein GI | 172062320 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.86575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTCG TCGACCGTCG TCGGGCCGAT CTCGGTAGCG TCGAAGCGAC GCGGTCGCGC
GGGGATGGCT CGCATGCGGT GCCGCGCGAC GTCGGCATGG TCACGCGGGT TCGCCACGCA
GTGTGTGTGG CACTGATCTG CGGTGGTGTC GCGAGCCTTT TCGAGCCGGT CCATGCGCAA
GTGCCGGATG CGGGGCGAGC GATGCGCGAT ATCGAGACGC CGCGGCCGGA TCTGCCGCCG
GAAACCGCGC CCGACCTGAC GGTTGCGCCG TCGGAAGAGG CTGCCGGGAG CGCGCCCGAG
TCGGGGCCTC GCGTGCTCGT TCGCGCGTTC GCGTTCGACG GCAATACCGT GTTCGGCAAC
GACGAGTTGC AGCCGCTCGT CGCCGATCTT GCGGGCAGCA CGCTGGGTTT CGCCGACCTG
CAACGCGCCG CCGCGCGCAT CACTGCCTAC TATCGCCGCC ATGGCTACGT GCTTGCGCGC
GCCTATCTGC CTCGCCAGGA CATCGACGAC GGCGTCGTGC GTATCGAAAT CGCCGAAGGA
CGCTACGGCG CAATCACGAT CCAGAATCAT TCGCGCGTGC TCGGTGCCGC GCTGCGCCAG
CCGCTCTCGG CGCTGCATCC GGGCGATGTC GTGCGCGGGT CCGGTCTCGA GCGCAGCCTG
CTGCTGCTCG ACGACCTGGC CGGCGTCGCT GCGCGCGGCA CATTGCGGCC GGGCGATGCG
CCTGGCACCA CCGATCTCGT CGTCGACGCC GACAAAGGGC CGCTCGCGTC CGGATCGCTC
GAATTCGACA ACTTCGGCGA CGTATCGCTC GGGCGCTACC GTGTCGGCGG CAGCGTCGAC
GTCAATTCGC CGCTGCGGCT CGGCGATCGC CTGAGCCTGC GCGGGCTCGT CAGCAACGAG
TTGCAGCGCT ACTACCGCGC CGGTTACCAG CTACCGGTCG GGCCCGCGTC TACGCGAGTC
GGCGTTGCGT ATTCGTCGCT GCGCTACCGG CTCGGCGGAG CGTTCTCGGA TCTCGATTAC
AGCGGCCGTG CGACGGTGCA GACCGCCTAC GTGACGCAGC CGCTCGTGCG CGCGCGAAAC
CTGAGCGTCA CCGCGCAGGC CCAGTACGAA AACAAGAACC TGCGCGACGA CTACGGGATA
TTCGATATAC GTCGCGACAA GAACGTTGGA CTGTGGACCT TCGGCGTCAG CGGCAATAGT
CAGGACGGCT GGCTGGGGGG CGGCCGCAAC GGGTTCTCGG TGATGTTCGG TGTCGGGCGA
CTGCGCAGCA ACGATCCGCT CAAGACGGAT GTGCTGAAAA AATCGATCGG CAGCTTTACG
AAGCTGAATG TGAGCGCGCT GCGCGTGCAG GCGCTGGGGC GTCGGTTCGA GCTGTACGCG
CAATTCAGCG CGCAGTTCGC GTCGCGCAAT CTCGACGAAT CGGAGAAGTT CAGTCTCGGC
GGCCCGTACG GCGTGCGCGC CTACGCGCTC GGCACCGGCA GCGGCGACCA GGGCTGGCAG
GCCAGCGCGG AGTTGCGGTA TCTCGTCGCA CCGGGATGGC AGGTCAGCAC GTTCGTCGAC
GCCGGGCGCG TGCAGGCCGA CAAGTTCCCG TGGACGCGTG AGCGAAACAT GCAGCACATG
CAGGCCGGCG GTGTCGGCGC GAGCTGGTTT GGCGAGAAGC GCCAGGTGGC GCTGACGGCC
GCATGGCCGC TCGGCGCGGC GTTCGGCTCG CCGACTCGCG CGCCGAGCGT ATGGGTTCAA
GCCGCTCAGT ATTTCTGA
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| Protein sequence | MQVVDRRRAD LGSVEATRSR GDGSHAVPRD VGMVTRVRHA VCVALICGGV ASLFEPVHAQ
VPDAGRAMRD IETPRPDLPP ETAPDLTVAP SEEAAGSAPE SGPRVLVRAF AFDGNTVFGN
DELQPLVADL AGSTLGFADL QRAAARITAY YRRHGYVLAR AYLPRQDIDD GVVRIEIAEG
RYGAITIQNH SRVLGAALRQ PLSALHPGDV VRGSGLERSL LLLDDLAGVA ARGTLRPGDA
PGTTDLVVDA DKGPLASGSL EFDNFGDVSL GRYRVGGSVD VNSPLRLGDR LSLRGLVSNE
LQRYYRAGYQ LPVGPASTRV GVAYSSLRYR LGGAFSDLDY SGRATVQTAY VTQPLVRARN
LSVTAQAQYE NKNLRDDYGI FDIRRDKNVG LWTFGVSGNS QDGWLGGGRN GFSVMFGVGR
LRSNDPLKTD VLKKSIGSFT KLNVSALRVQ ALGRRFELYA QFSAQFASRN LDESEKFSLG
GPYGVRAYAL GTGSGDQGWQ ASAELRYLVA PGWQVSTFVD AGRVQADKFP WTRERNMQHM
QAGGVGASWF GEKRQVALTA AWPLGAAFGS PTRAPSVWVQ AAQYF
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