| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3278 |
|---|
| Symbol | |
|---|
| ID | 6180091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 182979 |
|---|
| End bp | 183437 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641683052 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_001809966 |
|---|
| Protein GI | 172062315 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.882377 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTG ACGCTATCGA CCGCCGGATT CTGAGCGCGC TGCAGCGCGA CGGTCGCATG
CAGAACGTGG AGCTCGCGCA CGAAGTCGGG CTGTCGCCGT CGCCGTGCCT GCGGCGCGTG
CGGCTGCTCG AGGAAGCGGG CGTGATCGAG AAGTACGTGG CCGTGCTGAA CCCGGCGAAG
GTCGGCAAGG GGCTGACGAT CTTCACGCGC GTGTGGCTGA AGGGGCAGGA CGCGGAATCC
GTGAACCGCT TCGCCGAGGC CGTCCAGCAG ATGCCGGAAG TGGTCGAATG CCACCTGATG
GCCGGCGACT GCGATTTCCT GTTGCGTGTC GTCGCGGCCG ACATCGACGA CTACCGGCGC
TTCCAGATGG AAACCCTGAC GCGCATCCCC GGCGTGCTGA GCGTGAAGAC CGATATTCCG
ATGCAGAAGG TCAAGCTCAC GTCGGCGCTG CCGACCTAG
|
|---|
| Protein sequence | MKLDAIDRRI LSALQRDGRM QNVELAHEVG LSPSPCLRRV RLLEEAGVIE KYVAVLNPAK
VGKGLTIFTR VWLKGQDAES VNRFAEAVQQ MPEVVECHLM AGDCDFLLRV VAADIDDYRR
FQMETLTRIP GVLSVKTDIP MQKVKLTSAL PT
|
|---|
| |