| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3269 |
|---|
| Symbol | |
|---|
| ID | 6179586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 175697 |
|---|
| End bp | 176587 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641683043 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001809957 |
|---|
| Protein GI | 172062306 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTCG ATAACCTCGC GCTGTTCCTG CGCATCGTGG AGAAGGGCGG GCTGGCCGCG
GCCGGCCGCG AGGTCGGCCT GTCGCCGGCC ACGGTGTCCG AGCGGCTGGC GGCGCTCGAG
AGCCATTACG GCGCGGCGCT GCTCACGCGC ACGACCCGCG CGATCAGCCT GACCGACGAG
GGCCGCACGC TGGTGGCCGG CGCGCGGCGC CTGCTTGCCG AAGCGGATGA ACTCGAAAGC
CGCGTGCGGC TCGGCGCGCA GACGCTGTCG GGGCCCGTGC GGCTCAGCGC GCCGGCCGAC
CTCGGGCAGG CGCGTGTCGT GCCCGTCGTC GACGCGTTCC TGGCCGAGCA TCCGGGCGTC
ACGGTCGACC TGCATCTCGG CGACGGCTAT GTCGATCTCG TCGGGCAGGG GCTCGATTTC
GCGATCCGGC GCGGCACGCT CGCGGACAGC GCGCTGCGCA GCCGCTCGCT CGGCCGGTCG
CGCCGCGTGG TGTGCGCCGC GCCCGCCTAT CTCGCCGAGC GCGGCACGCC GCGGCATCCG
GACGAACTTG CCGCGCACGA CTGCATCGTG ATGCGTTTCG GTCAGGAACT GTATGCCGAG
TGGCCGTTCC GCATCGACGA CGCACTGAAG CGCGTGATGG TGCGCGGCCG GCGCGTGGCC
AACGACGGCG CGCTCGTGCG CGCGTGGTGC GTCGCGGGGC ACGGCATCGC GCTGAAGTCG
CTGCTCGACG TCGAGCAGGA TCTGGCGTCC GGCGCGCTCG TCGAAATCCT GCGCGACTTC
TCGCCGGGCG AAGTCGACCT GCAGATCGTT TATCCGGGCG GCGCCGCGCA GCCGCGGCGC
GTGCGGGCGC TGATCGAGCG ACTGGCGCAG GCGCTGGCAG CAGCGGAATG A
|
|---|
| Protein sequence | MLLDNLALFL RIVEKGGLAA AGREVGLSPA TVSERLAALE SHYGAALLTR TTRAISLTDE
GRTLVAGARR LLAEADELES RVRLGAQTLS GPVRLSAPAD LGQARVVPVV DAFLAEHPGV
TVDLHLGDGY VDLVGQGLDF AIRRGTLADS ALRSRSLGRS RRVVCAAPAY LAERGTPRHP
DELAAHDCIV MRFGQELYAE WPFRIDDALK RVMVRGRRVA NDGALVRAWC VAGHGIALKS
LLDVEQDLAS GALVEILRDF SPGEVDLQIV YPGGAAQPRR VRALIERLAQ ALAAAE
|
|---|
| |