| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3256 |
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| Symbol | |
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| ID | 6179252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 162851 |
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| End bp | 163729 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641683030 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001809944 |
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| Protein GI | 172062293 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00789281 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCTCG ATCATCTTCA TCCGGAACGC TGGACGTTCC TGTGGAACGC GTTGTCCACG
CTTTCGCTCA GGCTTTGCGC CGCCCTCGCG CTACTCGTCG CGGGCTGGTG GCTGTCGAAG
CGCATCGGCA ACTGGCTGAG CCGGCTGCTC GCGAACAAGG AGCGCGTCGA CGACACGCTG
CGGCCGATCC TCTGCGACGT CGCCGTGTGG GGCATCCGCA TCGTCGCGAT CGTCGGTGCG
CTTTCACAGC TCGGCATCGA AACCGCGAGC ATCGTCGCGG TGCTCGGCGC GGCCGGCCTC
GCGATCGGGC TCGCGCTGCA AGGCACGATG CAGAACATCG CGGCCGGCAT CATGCTGTTG
CTGCTGCGCC CGTTCAAGGT GGGCGACTAC ATCGACGGCG GCACGGGTGT CGCGGGCACC
GTCGACGAGG TCGGGCTCTT CATGACGCGG CTGACGAAGC CGGACGGCAT CTGCGAATAC
GTGCCGAACA GCGCGCTGTG GGGCAGCGCG ATCCGCAACT ACACGCGCAA TCCGACCCGC
CGTCTCGATC TCGAAGTGGA AGTGTCCGTG CACGACGACA TCGACCGTGC GCTCGATGCG
CTGCGCGCGC TGGCGGAAGC CGATCCCGAC GTGCTGCAGG ATCCCGCACC GGACGTGATG
GTGATGCGCT TCGACGACAG CACGGCCGTC GCGAACATGC GCGTGTGGAC GCACACGGAC
AAGTTCTGGG CGATGCGCTG GCGTCTCGCG CGCCAGGTGC GCAAGACGCT CGCCGACGCG
GACTGCGCGC TGCCGATCCG CACGCGCGAG CTGCACATCG TGCACGACGT CGAACGGCAG
CCGCAGCAGA TCGAGCCGCG CCGCGTACAG GCGTCGTGA
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| Protein sequence | MFLDHLHPER WTFLWNALST LSLRLCAALA LLVAGWWLSK RIGNWLSRLL ANKERVDDTL
RPILCDVAVW GIRIVAIVGA LSQLGIETAS IVAVLGAAGL AIGLALQGTM QNIAAGIMLL
LLRPFKVGDY IDGGTGVAGT VDEVGLFMTR LTKPDGICEY VPNSALWGSA IRNYTRNPTR
RLDLEVEVSV HDDIDRALDA LRALAEADPD VLQDPAPDVM VMRFDDSTAV ANMRVWTHTD
KFWAMRWRLA RQVRKTLADA DCALPIRTRE LHIVHDVERQ PQQIEPRRVQ AS
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