Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3244 |
Symbol | |
ID | 6180584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 150031 |
End bp | 150936 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641683019 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001809933 |
Protein GI | 172062282 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.432164 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGATC CGATTCTCGC CGCGCCGACC GACAACGGCG TGCCGGTCAG CCTGCGCTCG AGCCGCGGGC GTGGCTGGCA TGGCTTCGGC GCGTCGCTGC TGGAGATTCG CGCGGGCACG TACCGGATCC CGGCCGCCGA ACATCACCGC ATCGGCGTGC ATATCGGCTC GCCCGTGCGC GCGGATTGTG TGTGCGACGG CGCACGCGTG TCGCGCATCC AGGCGCATGG TGACGTCGAC GTGATTCCCG CCGGCCTGCC GGGCGAATGG ACCGACAGCG CCGACTGCCG GATCCTGCAC ATCGCGCTCA GCGATACGTT CGTGCGGCGC ACGTTCGACC AGCTCGAGCT GAAGCCGTCT CAGGCGCAGA TCCGCCGCCG GCTGCAGGTG CGCGATCCGC GGCTGCAGCA CATCGCCTGG GCGATGGCCG CCGAACTCGA AGCGGAAGAC GCGTCGGACC CGCTCTATGC GGAGAGCCTG TGCACGGCGC TCGTCGCGCG GCTGGCCGAC AGCCAGCCGG CGTTCCGCGA GCGCCGGCGT ACGCTCGCGC CGAAGGCGGC GGCGCGCGTG ATCGACTATG TCGAGGCCAA CCTCGAGCGC CGCATGACGC TCGCCGAACT CGCGGCGCTC GTGTCGATCA GCGTGCCGCA TTTCAAGGTC CTGTTTCGCG AGACGCTCGG GATGCCGGTG CATCAATACG TGGTGCGACG CCGGGTCGAG CGCGCGAAGG CGTTGTTGCT CGAAGGCCGG CTCGGCATCA GCCAGATCGC GCTCGAGGCC GGTTTCGCGC ATCAGAGCCA CATGGCGAGC TGGATGAATC GCGTGCTGGG TGCGACGCCG ACGGAGATCG CGCGGTCGGC GGCGCGAGGT GCGTTGCGGC TCGCTTACGA CGGCGAGGAC CGTTGA
|
Protein sequence | MSDPILAAPT DNGVPVSLRS SRGRGWHGFG ASLLEIRAGT YRIPAAEHHR IGVHIGSPVR ADCVCDGARV SRIQAHGDVD VIPAGLPGEW TDSADCRILH IALSDTFVRR TFDQLELKPS QAQIRRRLQV RDPRLQHIAW AMAAELEAED ASDPLYAESL CTALVARLAD SQPAFRERRR TLAPKAAARV IDYVEANLER RMTLAELAAL VSISVPHFKV LFRETLGMPV HQYVVRRRVE RAKALLLEGR LGISQIALEA GFAHQSHMAS WMNRVLGATP TEIARSAARG ALRLAYDGED R
|
| |