| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3162 |
|---|
| Symbol | |
|---|
| ID | 6179988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 61208 |
|---|
| End bp | 61594 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641682938 |
|---|
| Product | 4-carboxymuconolactone decarboxylase |
|---|
| Protein accession | YP_001809852 |
|---|
| Protein GI | 172062201 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR02425] 4-carboxymuconolactone decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGACC AGCAACGTTA TGAAGCAGGG ATGAAGGTGC GTCGCGCGGT GCTCGGCGAC
GCGCACGTCG ATCGTTCGAT CGAGAACCGC ACCGAGGTGA CCGACGAATT CCAGAACCTG
ATCACGCGCT ACGCGTGGGG TGAGATCTGG ACGCGCGACG GCCTGCCGCG CCATACGCGC
AGCCTGCTGA CCATCGCGAT GATGGTCGCG CTGAACCGCG GCGAGGAACT CGCGCTGCAC
TTGCGCGCCG CGCGCAACAA CGGCGTGACG CGCGACGAGA TCAAGGAAGT GCTGCTGCAG
ACCGCGATCT ACTGCGGCGT GCCGGCCGCG AACTCCGCGT TCCATCTCGC GGACAAGATC
TTCAAGGAAC AGGATGGGGC CGCCTAG
|
|---|
| Protein sequence | MDDQQRYEAG MKVRRAVLGD AHVDRSIENR TEVTDEFQNL ITRYAWGEIW TRDGLPRHTR
SLLTIAMMVA LNRGEELALH LRAARNNGVT RDEIKEVLLQ TAIYCGVPAA NSAFHLADKI
FKEQDGAA
|
|---|
| |