Gene BamMC406_3161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3161 
Symbol 
ID6180034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp60412 
End bp61197 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content69% 
IMG OID641682937 
Product3-oxoadipate enol-lactonase 
Protein accessionYP_001809851 
Protein GI172062200 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR02427] 3-oxoadipate enol-lactonase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTCG CCACTGTCAA CGGCGTGAAA CTGCATTACC GGATCGACCG TGCCGCGCGC 
GACGACGCGC CGTGGCTCGT TTTCTCGAAC TCGCTCGGCG CCGACCTGCA GATGTGGGCG
CCGCAGATTC GCCCGCTCAC CCAGCACTTC AACATCCTGC GCTACGACAC GCGCGGCCAC
GGCCATTCCG ATGCACCGGC CGGCTCGTAC ACGGTCGACC AGCTCGCGGG CGACGTGATC
GGCCTGCTCG ACCACGTCGG CATCGATCGC GCGCACTTCT GCGGCATCTC GATGGGCGGC
CTGACCGGCG CCGCGCTCGC CGCGCGCTTC CCGTCGCGCA TCGTGCGCGC CGTGCTGGCG
AATACCGCCG CCAAGATCGG TTCACCGGAA GTATGGGCGC CGCGTGCGCA GAAGGCGCGT
GCCGAAGGAA TGGCCGCGCT CGCCGACGCC GTGCTGCCGC GCTGGTTCAC CGACGCGTTC
GTCGATCGCG AGCCGCGCCT GTTCGACGCG ATCCGCGACA CCTTCGTGCA TACCGACAAG
GACGGTTACG CGGCGAACTG CGACGCGCTG AACGCGGCCG ACCTGCGCGA GGAAGTGAAG
GGCATTGCGC TGCCGGTGCT CGTCGTGACC GGTGCGAAGG ACATGTCGAC GCCGCCCGAC
CAGGGCCGTG CGCTGGCTGC CGCGATTCCC GGCGCGCGCC ACGTCGAATT CGACGCCGCG
CATATTTCGA ACATCGAGTG CACCGACGGT TTCAACCGCG CGCTGCTCGA CTTCCTGACC
GCGTGA
 
Protein sequence
MPFATVNGVK LHYRIDRAAR DDAPWLVFSN SLGADLQMWA PQIRPLTQHF NILRYDTRGH 
GHSDAPAGSY TVDQLAGDVI GLLDHVGIDR AHFCGISMGG LTGAALAARF PSRIVRAVLA
NTAAKIGSPE VWAPRAQKAR AEGMAALADA VLPRWFTDAF VDREPRLFDA IRDTFVHTDK
DGYAANCDAL NAADLREEVK GIALPVLVVT GAKDMSTPPD QGRALAAAIP GARHVEFDAA
HISNIECTDG FNRALLDFLT A