Gene BamMC406_3148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3148 
Symbol 
ID6180833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp48609 
End bp49502 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content69% 
IMG OID641682924 
Productchromosome replication initiation inhibitor protein 
Protein accessionYP_001809838 
Protein GI172062187 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID[TIGR03298] transcriptional regulator, ArgP family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.99123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACT ACGCGTTGCT CGACGCCCTG GCCGCGGTGA TCCGGCACGG CTCGTTCGAA 
CGGGCGGCCA AGGAGCTGAA CGTCACGCCG TCGGCGGTAT CGCAGCGCGT GAAGCTGCTG
GAGGAACGCG TCGGCAGCGT GCTCGTCAAG CGCGGGCCGC CGTGCGTCGC GACGACGTCC
GGCGCGCTGT TGTGTCGGCA TACGGAGCGC GTGCAGTTGC TCGAGGCCGA ACTGGGCGGC
CGGATGCCCG CGTTGCCGGG CCAGATCGCG AGCGCGTGGC CGACGTTGCG CGTGGCCGTC
AACGACGACA GCGTCGCGAC CTGGTTCATC GACGCGGTCG GGCCCTTCTG TACCGAGCGC
GAGACCTTGC TCGACCTCGT GATCGACGAC CAGGACCATA CGGCCGCGCG CATTCGCGAC
GGCAGCGTGC AGGGCGCGGT GACCGCGCAG GCCGAGCCGA TCCAGGGATG CCGGTCGACG
CGGCTCGGGC GCATCCGCTA TCGCGCGGTG TGTTCGCCGG CGTTTTACGA CCGCTATTTC
GGCGCGGGCA TCACGCGCGA TGCACTGCGC CGCGCGCCGT GCGTGATGTT CAATCCGAAG
GATGGCCTGC AGGCACGCTT CATCCGGCGC GTGACGCGTG CGGATCTCGA TCCGCCGCAA
CACTGGATCC CGCACGTGGC GGGCTACCTG CGCGCATGCG AAACGGGGCT GGGATGGGGA
ATGTGCCCGG ACCGGATGGT CGATCGCCAG CTGGCGGCGG GCGAACTGGT CGACATGTCG
CGCGGGCGGA CCGTCGATAT CGAGCTGTAC TGGCAGAGCT GGCGCCTGTC GATCGGCTGG
CTGGACGACT TCAGCGCGGC GCTCAAGACG CGTGCCGCGC TGTTTCTCGA CTGA
 
Protein sequence
MLDYALLDAL AAVIRHGSFE RAAKELNVTP SAVSQRVKLL EERVGSVLVK RGPPCVATTS 
GALLCRHTER VQLLEAELGG RMPALPGQIA SAWPTLRVAV NDDSVATWFI DAVGPFCTER
ETLLDLVIDD QDHTAARIRD GSVQGAVTAQ AEPIQGCRST RLGRIRYRAV CSPAFYDRYF
GAGITRDALR RAPCVMFNPK DGLQARFIRR VTRADLDPPQ HWIPHVAGYL RACETGLGWG
MCPDRMVDRQ LAAGELVDMS RGRTVDIELY WQSWRLSIGW LDDFSAALKT RAALFLD