| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3141 |
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| Symbol | |
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| ID | 6180114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 41528 |
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| End bp | 42250 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641682917 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001809831 |
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| Protein GI | 172062180 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.76943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGAC CCTGGTCGTT TGACGGCAAG ACCGTCGTCG TGACGGGCGG CACGTCGGGC
ATCGGCGCGC GCACCGCGTG GCGTTTCGCG GAAGCGGGCG CGTCGGTCGT CGCCCTCGGG
CTCGAGGCCG CCGGCCCGCA TGCGCCGGTG CATCCCGGGA TCCGCTGCGT GGAGCTCGAC
GTGACCGATA GCGAAGCGTT GACGCGCAGG ATCCGCGCGC TGCCGCGCGT CGACACCCTC
GTCAACGGCG TCGGCATCAG CCGGAACGCC GACGAGTACA GGCTGGACCA GTTCGAGCTT
GTGCTGAACG TGAACCTGAC GTCGGTGATG CGGGCATCCG ACGCCGCGCT GCCGGCGCTG
TCGGTGAGCG GCGGCAGCAT CGTCAATGTC GCGTCGATGT ACACGTACTT CGGCAGCAAG
GACCGGCCCG CCTACAGCGC GAGCAAGGGC GGCATCGCGC AGCTCACGCG CTCGCTCGCG
CAGGCGTGGG CCGAGCGCGG CATTCGCGTG AACGCGGTGG CGCCCGGCTG GATCGACACG
CCGCTCAGCA GCGGGCTGAT GGCCGACACG CACGCGTCGC GGCGGATTCC CGAGCGCACG
CCGCTCGCGC GCTGGGGCAC GGCCGACGAG GTCGCGGAAG TGATCCTGTT CCTGTGCTCG
CCCGGCGCGT CCTTCGTCAC CGGCGCGATC GTGCCGGTGG ACGGCGGGTA TTCGACGGTA
TAG
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| Protein sequence | MSRPWSFDGK TVVVTGGTSG IGARTAWRFA EAGASVVALG LEAAGPHAPV HPGIRCVELD
VTDSEALTRR IRALPRVDTL VNGVGISRNA DEYRLDQFEL VLNVNLTSVM RASDAALPAL
SVSGGSIVNV ASMYTYFGSK DRPAYSASKG GIAQLTRSLA QAWAERGIRV NAVAPGWIDT
PLSSGLMADT HASRRIPERT PLARWGTADE VAEVILFLCS PGASFVTGAI VPVDGGYSTV
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