Gene BamMC406_3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3100 
Symbol 
ID6177886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3442511 
End bp3442777 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content64% 
IMG OID641682877 
Producthypothetical protein 
Protein accessionYP_001809791 
Protein GI172062139 
COG category[S] Function unknown 
COG ID[COG0759] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00278] conserved hypothetical protein YidD 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.880044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0421646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGG TACTGATCGC CTTGCTGCGC TTCTACAAGG TTGCCGTGAG CCCTATGCTC 
GGCAACCGTT GCCGTTTTTA TCCTTCCTGT TCGGATTACG CGCGCGAGGC AATCCAGTAT
CATGGCGCCG CGCGCGGCAC GTATCTCGCC GTCAGGCGCG TGTGCCGATG CCATCCGTTT
TCCGCGGGCG GCATCGACCT CGTCCCGCCG CCCAACTCCG ACACTCGCGC TCGCGGCGAA
GCCGACGCGC GGTCCCATCG ACTCTGA
 
Protein sequence
METVLIALLR FYKVAVSPML GNRCRFYPSC SDYAREAIQY HGAARGTYLA VRRVCRCHPF 
SAGGIDLVPP PNSDTRARGE ADARSHRL