Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3099 |
Symbol | |
ID | 6177890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 3440838 |
End bp | 3442502 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641682876 |
Product | putative inner membrane protein translocase component YidC |
Protein accession | YP_001809790 |
Protein GI | 172062138 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0706] Preprotein translocase subunit YidC |
TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.462896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0227553 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATCA AACGCACCGT CCTATGGGTG ATCTTCTTCA TGTCAGCTGT CATGCTGTAC GACAACTGGC AGCGCTCCCA TGGACGCCCG TCGATGTTCT TCCCGAGCGC CACGCAGACG GCCCCCGCCG CTGCCGGCGG CGCATCGGGC ACGGGCGCGA CGACGACGAC CGCAGGTGAA GTGCCTGCCG CCGCCGCGGG CACCGCACCG TCGACGACGG CACCGGCCGC ACAGGCGCAG CTCGTGAAGT TCTCGACCGA CGTCTATGAC GGCGAAATCG ACACGCGCGG CGGCACGCTC GCGAAGCTGA CGCTGAAGAA GCAGGGCGAC GGCAAGCAGC CCGACCTCTA CATCACGCTG TTCGACCACA CGGCCGGCCA CACGTACCTC GCACGCACGG GCCTGCTCGG CGGCGACTTC CCGAACCACA ACGACGTCTA CACGCAGGTC AATGCGGGCC CGACGTCGCT GACGGGCGAC CAGAACGCGC TGAAGCTGTC GTTCGAATCG CCGGTGAAGG GCGGCGTGAA GGTCGTGAAG ACCTACACGT TCACGCGCGG CAGCTACGTG ATCGGCGTCG ATACCAAGAT CGACAACGTC GGCACGGCAC CGGTCACGCC GACGGTCTAC ATGGAACTGG TGCGCGACAA CACGGCCGTC GAAACGCCGA TGTTCTCGCA TACGTTCCTC GGGCCGGCGG TCTACACGGA CGCGAAGCAC TTCCAGAAGA TCGATTTCAG CGACCTCGAC AAGAACAAGG CGAACTTCGA GAAGGCGGCC GACAACGGCT GGGTCGCGAT GGTGCAGCAC TACTTCGCGT CGGCCTGGAT TCCGCAGCAG GGCGCGAAGC GCGACATCTA CGCTGAAAAG ATCGATCCGG CGCTGTATCG CGTCGGCGTG AAGCAGCCGG TCGCCGCGAT CGCTCCGGGC CAGTCGGCCG ACGTGCAGGC ACGCCTGTTC GCCGGTCCGG AAGAAGAGCG CATGCTCGAA GGCATCGCGC CGGGCCTGGA ACTCGTGAAG GACTACGGCT GGGTGACGAT CATCGCGAAG CCGCTGTTCT GGCTGCTCGA GAAGATCCAC GGCTTCGTCG GCAACTGGGG CTGGGCGATC GTGCTGCTGA CGGTGCTGAT CAAGGCCGTG TTCTTCCCGC TGTCGGCCGC GAGCTACAAG TCGATGGCGC GCATGAAGGA AATCACGCCG CGCATGCAGG CGCTGCGCGA ACGCTTCAAG AGCGATCCGC AGAAGATGAA CGCCGCGCTG ATGGAGCTGT ACAAGACCGA GAAGGTCAAT CCGTTCGGCG GCTGCCTGCC GGTCGTGATC CAGATCCCGG TGTTCATCTC GCTGTACTGG GTGCTGCTCG CGTCGGTCGA AATGCGCGGT GCGCCGTGGA TTCTGTGGAT TCACGACCTG TCGCAGCGCG ATCCGTTCTT CATCCTGCCG GTGCTGATGG CCGTCTCGAT GTTCGTGCAG ACGAGCCTGA ACCCGACGCC GCCGGACCCG GTCCAGGCGA AGATGATGAA GTTCATGCCG ATCGCGTTCT CGGTGATGTT CTTCTTCTTC CCGGCCGGCC TGGTGCTGTA CTACGTCGTG AACAACGTGC TGTCGATCGC GCAGCAGTAC TACATCACGC GCAAGCTCGG CGGGGTCAAG AAGAAGCCGG CCTGA
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Protein sequence | MDIKRTVLWV IFFMSAVMLY DNWQRSHGRP SMFFPSATQT APAAAGGASG TGATTTTAGE VPAAAAGTAP STTAPAAQAQ LVKFSTDVYD GEIDTRGGTL AKLTLKKQGD GKQPDLYITL FDHTAGHTYL ARTGLLGGDF PNHNDVYTQV NAGPTSLTGD QNALKLSFES PVKGGVKVVK TYTFTRGSYV IGVDTKIDNV GTAPVTPTVY MELVRDNTAV ETPMFSHTFL GPAVYTDAKH FQKIDFSDLD KNKANFEKAA DNGWVAMVQH YFASAWIPQQ GAKRDIYAEK IDPALYRVGV KQPVAAIAPG QSADVQARLF AGPEEERMLE GIAPGLELVK DYGWVTIIAK PLFWLLEKIH GFVGNWGWAI VLLTVLIKAV FFPLSAASYK SMARMKEITP RMQALRERFK SDPQKMNAAL MELYKTEKVN PFGGCLPVVI QIPVFISLYW VLLASVEMRG APWILWIHDL SQRDPFFILP VLMAVSMFVQ TSLNPTPPDP VQAKMMKFMP IAFSVMFFFF PAGLVLYYVV NNVLSIAQQY YITRKLGGVK KKPA
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