Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3061 |
Symbol | |
ID | 6178182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 3399530 |
End bp | 3400918 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641682838 |
Product | sun protein |
Protein accession | YP_001809753 |
Protein GI | 172062101 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGAA CCCGTTCCTC CGCTCCGTCT TCCTCCGGCC GCCCCGCGCG CCTGTCCGCG CTGCGTCTCG CGCCCGATTC GCTCGGCTTC GCGCTCGACG CGGCCGCGCA GGCAGTCGAT GCGGTGCGGC GCGGTACCGC GCTGCCGGCG GCACTGGCCG CGGTGTTCGC GCAGATGCCG GCCGATGCGC AGGCGCTGGC GCGCGGCGCG ACGCAGGACG TCGCCTACCG GACGATGCGG CGCCTCGGCA GCGCGGACTG GCTGATCGGC CGGCTCGTTG GCAAGGCGCC GCCCGCGCAC GTGCAGGCGG TACTCGCCGC CGCGCTTGCG CTGCTGCTCG ATCCGGAGGA GACGGCCGCG TATCCGGCGT TTACGATCGT CGACCAGGCC GTCACCGTGA TCGGCGCGCG GCGCGAATTC GCGTTCGCGA AGGGGCTGGT GAACGCGGTG CTGCGCCGTT TCCAGCGTGA ACGCGACGCG CTCGTCGCGG CGCTGCAGGA CGATCCGGTC GCTCGCTGGA ACTACCGTCC GTGGTGGATC GATGCGGTGA AGCGCGCATG GCCGGACACA TGGCAGGCGA TCCTCGCGGC CGGCGAGCGC CAGGGGCCGC TGACGCTGCG CGTGAACGCG CGCCGCGCGA GCGTCGACGC GTATCTCGAC ACGCTGCGCG CGAACGGGAT CGACGCGACC GCGATCGGCC GCCATGCGGT GCGGCTCGCA TCGGCGCTGC CGGTCGATCG CATTCCGGGC TTCGCGGACG GCGTCGTGTC GGTGCAGGAT GCCGGCGCGC AGCTCGCCGC CGAATGGCTC GGCGCGCGTG ACGGCATGCG CGTGCTCGAT GCATGCGCGG CACCGGGCGG CAAGACCGGC CATATCCTCG AGCTGGCCGG CGCTGAGGTC GTTGCGCTCG AAAGCGACGC GACCCGCGCG GCGCGCATCG GCGAGAACCT CGCGCGCCTG TCGCTCGCGG CGGACGTGTG CGTCGGCGAT GCCGGCGCGC CGGATGCGTG GTACGACGGC CGGCCGTTCG ATCGCATCCT CGCCGACGTG CCGTGCTCGG CGTCGGGCAT CGTGCGCCGT CATCCGGACA TCCGCTGGCT GCGCCGCGAA GCCGACATCG CGGCACTCGT CGCGGAACAG CGTCGCATCC TGACGGCGTT GTGGCCGCTC GTGAAGCCGG GCGGCGAACT GCTCTACGTG ACCTGTTCGA TCTTCCCCGA GGAGGGCGAA TTGCAGGCCC GCTGGTTTGA AGCGGCCTGT GAAGATGCGG TACGATTGGA CGCGCCCGGC CAACTGCTGC CGGGCGGCGT GCCCGCCGTA GCGGCCGGCG CACTCGACCA GAACACCGAT CACGACGGAT TTTTCTACGC GCGGTTTCAG AAACGGTGA
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Protein sequence | MTRTRSSAPS SSGRPARLSA LRLAPDSLGF ALDAAAQAVD AVRRGTALPA ALAAVFAQMP ADAQALARGA TQDVAYRTMR RLGSADWLIG RLVGKAPPAH VQAVLAAALA LLLDPEETAA YPAFTIVDQA VTVIGARREF AFAKGLVNAV LRRFQRERDA LVAALQDDPV ARWNYRPWWI DAVKRAWPDT WQAILAAGER QGPLTLRVNA RRASVDAYLD TLRANGIDAT AIGRHAVRLA SALPVDRIPG FADGVVSVQD AGAQLAAEWL GARDGMRVLD ACAAPGGKTG HILELAGAEV VALESDATRA ARIGENLARL SLAADVCVGD AGAPDAWYDG RPFDRILADV PCSASGIVRR HPDIRWLRRE ADIAALVAEQ RRILTALWPL VKPGGELLYV TCSIFPEEGE LQARWFEAAC EDAVRLDAPG QLLPGGVPAV AAGALDQNTD HDGFFYARFQ KR
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