| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3056 |
|---|
| Symbol | |
|---|
| ID | 6178258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 3393904 |
|---|
| End bp | 3394536 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641682832 |
|---|
| Product | organic radical activating enzyme-like protein |
|---|
| Protein accession | YP_001809748 |
|---|
| Protein GI | 172062096 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0602] Organic radical activating enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.133958 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTACG CGGTCAAGGA AATTTTCTAC ACGTTGCAGG GCGAGGGCGC GAACGCGGGC
CGTCCGGCCG TGTTCTGCCG GTTCGCCGGC TGCAATTTGT GGTCGGGCCG CGAAGAGGAT
CGTGCGGAGG CCGTGTGCCG CTTCTGCGAT ACGGACTTCG TCGGCACCGA CGGCGAGAAC
GGCGGCAAGT TCAAGGACGC CGAAGCACTC GTCGCGACGA TCGCCGGCCT CTGGCCGGAT
GGCGAAGCGC ATCGCTTCGT CGTCTGCACG GGCGGCGAGC CGATGCTGCA GCTCGACCAG
CCGCTCGTCG ACGCGCTGCA CGCGGCGGGC TTCGAAATCG CGATCGAGAC CAACGGCTCG
CTGCCGGTGC TCGAGACGAT CGACTGGATC TGCGTGAGCC CGAAGGCCGA CGCGCCGCTC
GTCGTCACGA AGGGCAACGA ACTGAAGGTC GTGATCCCGC AGGACAACCA GCGGCTTGCC
GACTACGCGA AGCTCGATTT CGAGTATTTT CTCGTGCAGC CGATGGACGG CCCGTCGCGC
GATCTCAACA CGAAGCTCGC GATCGACTGG TGCAAGCGGC ATCCGCAGTG GCGGCTGTCG
ATGCAGACCC ACAAATACCT GAACATTCCC TGA
|
|---|
| Protein sequence | MTYAVKEIFY TLQGEGANAG RPAVFCRFAG CNLWSGREED RAEAVCRFCD TDFVGTDGEN
GGKFKDAEAL VATIAGLWPD GEAHRFVVCT GGEPMLQLDQ PLVDALHAAG FEIAIETNGS
LPVLETIDWI CVSPKADAPL VVTKGNELKV VIPQDNQRLA DYAKLDFEYF LVQPMDGPSR
DLNTKLAIDW CKRHPQWRLS MQTHKYLNIP
|
|---|
| |