Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3052 |
Symbol | |
ID | 6178505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 3390373 |
End bp | 3391521 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641682828 |
Product | rod shape-determining protein RodA |
Protein accession | YP_001809744 |
Protein GI | 172062092 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0772] Bacterial cell division membrane protein |
TIGRFAM ID | [TIGR02210] rod shape-determining protein RodA |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.125745 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTCG ACAAGCGCGC CTGGCTCGAC AAGATCAAGC AGATGTTCGC GGGTTTCGAC CGCCCGCTCG CCCTCATCGT GTTCCTGCTG CTGTGCGTCG GCATCGTCAC GCTGTACAGC GCGGCGATCG ACATGCCGGG CCGCGTCGAG GACCAATTGC GCAACATCCT GCTGACGTTC GTGCTGATGT GGGTGATCGC CAACATCCCG CCGACGACGC TGATGCGCTT CGCGGTTCCG CTATACACGT TCGGGGTCGC GCTGCTGGTC GCGGTCGCGC TGTTCGGGAT GACCAAGAAA GGCGCGAAGC GCTGGCTGAA CGTCGGCGTC GTGATCCAGC CGTCGGAAAT CCTCAAGATC GCGACACCGC TGATGCTCGC GTGGTACTAC CAGCGCCGCG AAGGCGGGCT GCGCTGGTAC GACTTCGTCG TCGCGTTCGG GATCCTGCTC GTGCCGGTCG GCCTGATCGC GAAGCAGCCC GACCTCGGCA CCGGCCTGCT CGTGTTCGCG GCCGGCTTCT TCGTGATCTA CCTCGCCGGC CTGTCGTTCA AGCTGATCGT GCCGGTGCTG GTCGCGGGCG TGATCGCGGT CGGCTCGATC GCCGTGTTCG AGGATCGCAT CTGCCAGCCC GAAGTGCAGT GGCCGCTGAT GCACGACTAC CAGAAGCACC GCGTGTGCAC GCTGCTCGAC CCGACCTCCG ACCCGCTCGG CAAGGGCTTC CACACGATCC AGGCCGTGAT CGCGATCGGC TCGGGCGGCG CACTCGGCAA GGGCTACCTG AAGGGCACGC AGGCCCACCT CGAATTCATT CCGGAGAAGC ACACCGACTT CATCTTCGCG GTGTTCTCGG AAGAATGGGG GCTCGCCGGC GGCCTCGTGC TGCTGACGCT GTACATGGCG CTGATCGCGC GCGGGCTCTA CATCGCCGCG CAGGGCGCGA CGCTGTTCGG CCGGCTGCTC GCGGGCTCGC TGACGCTCGC GTTCTTCGTC TACGCGTTCG TCAACATCGG GATGGTGAGC GGCGTGCTGC CCGTCGTCGG CGTGCCGTTG CCGTTCATGA GCTATGGCGG CACCGCGCTG GCAACGCTCG GCGTCGCGAT CGGGATGATC ATGAGCGTCG GGCGACAGCG GCGGCTGATG AAGAGCTGA
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Protein sequence | MQFDKRAWLD KIKQMFAGFD RPLALIVFLL LCVGIVTLYS AAIDMPGRVE DQLRNILLTF VLMWVIANIP PTTLMRFAVP LYTFGVALLV AVALFGMTKK GAKRWLNVGV VIQPSEILKI ATPLMLAWYY QRREGGLRWY DFVVAFGILL VPVGLIAKQP DLGTGLLVFA AGFFVIYLAG LSFKLIVPVL VAGVIAVGSI AVFEDRICQP EVQWPLMHDY QKHRVCTLLD PTSDPLGKGF HTIQAVIAIG SGGALGKGYL KGTQAHLEFI PEKHTDFIFA VFSEEWGLAG GLVLLTLYMA LIARGLYIAA QGATLFGRLL AGSLTLAFFV YAFVNIGMVS GVLPVVGVPL PFMSYGGTAL ATLGVAIGMI MSVGRQRRLM KS
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