| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3008 |
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| Symbol | |
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| ID | 6179090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3329037 |
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| End bp | 3331700 |
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| Gene Length | 2664 bp |
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| Protein Length | 887 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641682784 |
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| Product | type VI secretion ATPase |
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| Protein accession | YP_001809700 |
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| Protein GI | 172062048 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.694327 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATTT CAAGGCAGGC CTTATTCGGC AAACTCGGGC ATTCGCTGTT CCGAAGCGTC
GAATCCGCCA CGACTTTCTG CAAGCTGCGC GGCAACCCTT ACGTCGAACT GGTGCATTGG
CTGCATCAAC TGCTGCAGGC GCCCGACGGC GACCTCCAGC GGATCATCCG GCATTGCGAC
ATCGACGCCG AGGCACTCGA TCGGGACGTG CTGCGCGCGC TCGCCGCGCT GCCGGCCGGT
GCGAGTTCGA TCAGCGACTT CTCGCACCAT ATCGAAACGG CCGTCGAGCG CGCGTGGGTG
CTGGCCTCCC TGGATTTCGG CGACCGCCGC ATTCGCGGCG CATGGCTCGT CGCCGCGCTC
GTCAAGACGC CCGAACTGCG CCGCGTGCTG CTGTCGATCT CTCCGGCGTT CGGCAAGATC
CCGCTGGAAA GCCTGGGCGA GATGCTGCCC GCGTGGATCG ACGGCTCGCC GGAGGCGGCG
GATGCGCCGT ATGACGGCAC CGACTTCGGT GGCGCGGTGC CCGGCGAGGC CGCGGGCGCG
CTGGCGCCGG CAGCCGGTGG CGGCTCGCCG CTCGAGCAGT ACTGCAGCGA TTTGACTGCG
CGCGCGCGGG CGGGCGAGAT TGATCCGGTC GTCGGCCGCG AGCTCGAGAT CCGCACGATG
ATCGATGTGC TGTTGCGCAG GCGTCAAAAC AATCCGCTGC TGACCGGCGA GGCCGGGGTC
GGCAAGACGG CCGTGGTCGA ATGTCTGGCC CGCGCGATCG TCGACGGCGA CGTGCCGCCG
AAGCTGGCCG ACGTGCGCCT GTTGAGTCTC GACGTCGGCG CACTGCTTGC CGGCGCGAGC
ATGAAGGGCG AATTCGAGGC GCGTCTGAAG GGCGTGCTCG AGGCGGCGAC GAAGTCGGCG
GTGCCCGTCA TCCTGTTCGT CGATGAAATC CATACGCTGA TCGGCGCCGG CGGCCAGGCC
GGCACCGGCG ATGCGGCGAA CCTGCTGAAG CCGGCGCTCG CACGCGGTAC GCTGCGGACG
ATCGGCGCGA CGACCTGGGC CGAATACAAG CGCCATATCG AAAAGGACCC GGCGCTGACG
CGGCGCTTCC AGGTGCTCCA GGTGCCGGAG CCCGAGGAAG CGGCGGCGAT CGACATGGTG
CGCGGGCTCG CGCGCACCTT CTCGCGACAT CACGGCGTCG TCGTGCTCGA CGAAGCGATT
CGCGCGGCGG TGACGCTGTC GCATCGGTAC ATTCCGTCAC GGCAACTACC CGACAAGGCG
ATCAGTCTGC TCGACACCGC TTGCGCGCGC GTGGCGCTGT CGCAGCACGC GCCGCCGCGC
GAGTTGCAGA ACGTGCGCCA GCGCCTGCTG GCGGCGCAAG TCGAATGCGA TCTGCTCGAC
CAGGAGCGAT CCATCGGCCT GGGCGACACG GACGCGCTGG CCCGCACACA GGCGCGCATC
GCCGAGCTGG AACGCGAGGC GGCGAACGTC GAGGCGCGTT GGCGCGCGCA GGCCGACGCC
GCGCAAGCGC TGTTGAGCGC ACGCGAGACC GCACGCGACG CCGCCTCCGG CGTGCCGGCC
GACCGGCTGC AGGTGCTCGA GCGCGCGCTC GCGGAGCAGC AGGGCGAGAC GGCGTTCGTG
TTCCCTGAAG TGAACGAAGC GATCGTCGCG GCGATCGTGT CCGACTGGAC CGGCATTCCG
GTGCGCCGGA TGGTCACCGA CGAGGTCGCC GCGGTGCGCA CGCTGCCTGA CACGCTCGCG
GCGCGCGTCA TCGGCCAGCC GGACGCGCTG CAGCAGATCG GCGAGCGCGT GCAGACTGCG
CGCGCAGGGC TCACGGATCC GAAAAAACCG CTCGGCGTAT TCATGCTGGC CGGTCCGTCG
GGCGTCGGCA AGACCGAGAC GGCGCTGGCG CTGGCCGAGG CGCTGTACGG CGGGGAGCAG
AACCTGATCA CGATCAACAT GAGCGAGTAT CAGGAAGCTC ACACCGTGTC TGGGCTCAAG
GGGGCGCCGC CCGGCTATGT CGGTTACGGC GAGGGCGGCG TCCTGACCGA GGCGGTGCGG
CGCCGGCCCT ACTCGGTGGT GCTGCTCGAC GAGATCGAGA AGGCACATGC CGACGTGCAC
GAAATGTTCT TCCAGGTGTT CGACAAGGGG TATATGGAGG ACGGCGACGG ACGCTACATC
GATTTCCGCA ACACCACGAT TCTGCTGACC AGCAACGCGG GCTCCGACCT GATCACGAGC
CTCTGCTCGG ACGAGGCGCT CGCGCCTCGC ACGGATGCGC TGTGCGCGGC GCTCGGGCCG
GCGTTGCTCA AGACGTTCCC GGCCGCGTTT CTCGGCCGCG TGACCGTGGT GCCGTACAGG
CCGCTCGCGC AGGCGACGCT GGCGCGGATC GTGCGGCTGC ATCTGGATCG TGTGGTGACC
CGCATGGCCG ACGGGCACGG TGTGGCGTTC GGCTATGCGC CGGCGGTGCT CGACTACATC
GTCGAACGCT GCCTTGTCCA GGAAACGGGC GCGCGCCTGT TGATCGGCTT CATCGAGCAG
CACGTGCTGC CGCGGCTCGC CGCGCAGTGG CTGGATGCGC TGGCGGCGAA GCGTACGCTC
ACGCGGGTCG ACCTCGAACT GGTCGATGCG GGCGCGGTGC CTGCCGACGC CTTCATGTTC
CGCGCGTCGT ACGCGGACGA CTGA
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| Protein sequence | MTISRQALFG KLGHSLFRSV ESATTFCKLR GNPYVELVHW LHQLLQAPDG DLQRIIRHCD
IDAEALDRDV LRALAALPAG ASSISDFSHH IETAVERAWV LASLDFGDRR IRGAWLVAAL
VKTPELRRVL LSISPAFGKI PLESLGEMLP AWIDGSPEAA DAPYDGTDFG GAVPGEAAGA
LAPAAGGGSP LEQYCSDLTA RARAGEIDPV VGRELEIRTM IDVLLRRRQN NPLLTGEAGV
GKTAVVECLA RAIVDGDVPP KLADVRLLSL DVGALLAGAS MKGEFEARLK GVLEAATKSA
VPVILFVDEI HTLIGAGGQA GTGDAANLLK PALARGTLRT IGATTWAEYK RHIEKDPALT
RRFQVLQVPE PEEAAAIDMV RGLARTFSRH HGVVVLDEAI RAAVTLSHRY IPSRQLPDKA
ISLLDTACAR VALSQHAPPR ELQNVRQRLL AAQVECDLLD QERSIGLGDT DALARTQARI
AELEREAANV EARWRAQADA AQALLSARET ARDAASGVPA DRLQVLERAL AEQQGETAFV
FPEVNEAIVA AIVSDWTGIP VRRMVTDEVA AVRTLPDTLA ARVIGQPDAL QQIGERVQTA
RAGLTDPKKP LGVFMLAGPS GVGKTETALA LAEALYGGEQ NLITINMSEY QEAHTVSGLK
GAPPGYVGYG EGGVLTEAVR RRPYSVVLLD EIEKAHADVH EMFFQVFDKG YMEDGDGRYI
DFRNTTILLT SNAGSDLITS LCSDEALAPR TDALCAALGP ALLKTFPAAF LGRVTVVPYR
PLAQATLARI VRLHLDRVVT RMADGHGVAF GYAPAVLDYI VERCLVQETG ARLLIGFIEQ
HVLPRLAAQW LDALAAKRTL TRVDLELVDA GAVPADAFMF RASYADD
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