Gene BamMC406_3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_3007 
SymbolslmA 
ID6179095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3328292 
End bp3328957 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content67% 
IMG OID641682783 
Productnucleoid occlusion protein 
Protein accessionYP_001809699 
Protein GI172062047 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.8305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCGA CTTACCCGCA GGACCAAGCC GTAAAGGAAG ACCAGGCCAC GCCGTCCCGC 
CCGCGCCCGA AGCCGGGCGA GCGGCGCGTG ATGATCCTGC AGACGCTCGC CGCGATGCTT
GAGGTGCCGA AGCCCGAGAA AATAACGACC GCCGCGCTCG CGGCCCGGCT CGACGTGTCG
GAAGCCGCGC TCTACCGGCA TTTCGCCAGC AAGGCGAAGA TGTACGAAGG GCTGATCGAG
TTCATCGAGA CCACGTTCTT CGGCCTCGTC AATCAGATCG CTGCGCGCGA ACCCGACGGC
GTCCTGCAGG CCCGCGCGAT CGCGATGATG CTTCTCAATT TCGCCGTGAA GAACCCCGGG
ATGACGCGGG TGCTGACCGG CGAGGCGCTG GTCGGCGAAG ACGAGCGCCT CGCCGAGCGC
GTCGAGCAGA TGCTGGAACG AATCGAAGCG TCGCTCAGGC AGGCGCTGCG GCTCGCGCAG
CTCGACGCGG GCGCCGGCGA CCGATCGGCC GCGACCGCGC CGCTGCCGGC TGATTACGAC
CCGTCGATGC GCGCCAGCCT CATCGTCAGC TATGTGCTCG GTCGCTGGCA CCGATACGCG
AAAAGCGGTT TCGGCAAACC ACCGACCGAA CATGCGGACG CGCAACTGCG GCTGATCCTG
CAGTAG
 
Protein sequence
MQPTYPQDQA VKEDQATPSR PRPKPGERRV MILQTLAAML EVPKPEKITT AALAARLDVS 
EAALYRHFAS KAKMYEGLIE FIETTFFGLV NQIAAREPDG VLQARAIAMM LLNFAVKNPG
MTRVLTGEAL VGEDERLAER VEQMLERIEA SLRQALRLAQ LDAGAGDRSA ATAPLPADYD
PSMRASLIVS YVLGRWHRYA KSGFGKPPTE HADAQLRLIL Q