| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3006 |
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| Symbol | |
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| ID | 6176834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3327534 |
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| End bp | 3328325 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641682782 |
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| Product | pyrimidine 5'-nucleotidase |
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| Protein accession | YP_001809698 |
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| Protein GI | 172062046 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.632034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCGCAC GCCGCCTGCC CAAGCGTTCC GACCTGCCGG CGTCGCTGCG ACGCCGGCGC
ATCTCCCGCA GCCGGCCGCG TGCCGGCGCG CCCGTCTGGC TGTTCGATCT CGACAACACG
CTGCACCACG CATCGCACGC GATCTTTCCG GAGATCAACC GCGCGATGAC GCAGTACATC
ATCGACACGC TCCAAGTCGG GCGTGCCGAG GCCGACCGCC TGCGCACCGG CTACACGCAG
CGCTACGGCG CCGCGCTCCT CGGCCTCACT CGCCATCATC CGATCGATCC GCACGACTTC
CTGCGGGTCG TCCACACGTT TGCCGACCTG CCCGCGATGC TGCGCGCCGA GCGCGGCCTC
GCGCGCATCA TCGCCGCGCT GCCGGGTCGC AAGTTCGTGC TGACCAACGC GCCGGAGAAC
TACGCGCGTG CGGTACTGCG CGAGCTGCGC ATCGAGCGGC TGTTCGAACG CGTGATCGCG
ATCGAGCACA TGCGCGACCG GCGCACCTGG CGCGCGAAGC CCGACCACAC GATGCTGCGC
CGCGCCTTGC GTGCCGCGAA TGCGCGGCTG GCCGACGCGA TCCTCGTCGA AGATACACGC
AGCCATCTGA AACGCTACAA GCGGCTCGGC ATCGGTACCG TATGGATCAC CGGCCACCTG
CCGGGCCATC TGCCGAGCAT CGGCCGTCCA CATTATGTCG ACCAGCGCAT TCGTTCGTTA
AAATCGCTCC GACTGGGCAC ACGATCGGGG CGACAGAAAT GCAGCCGACT TACCCGCAGG
ACCAAGCCGT AA
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| Protein sequence | MSARRLPKRS DLPASLRRRR ISRSRPRAGA PVWLFDLDNT LHHASHAIFP EINRAMTQYI
IDTLQVGRAE ADRLRTGYTQ RYGAALLGLT RHHPIDPHDF LRVVHTFADL PAMLRAERGL
ARIIAALPGR KFVLTNAPEN YARAVLRELR IERLFERVIA IEHMRDRRTW RAKPDHTMLR
RALRAANARL ADAILVEDTR SHLKRYKRLG IGTVWITGHL PGHLPSIGRP HYVDQRIRSL
KSLRLGTRSG RQKCSRLTRR TKP
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