Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_3001 |
Symbol | hslU |
ID | 6177038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 3322510 |
End bp | 3323853 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641682777 |
Product | ATP-dependent protease ATP-binding subunit HslU |
Protein accession | YP_001809693 |
Protein GI | 172062041 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.259081 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA TGACCCCTGC CGAGATCGTC TCGGAACTCG ACAAGCACAT CATCGGTCAG GCCAAGGCGA AGAAGGCCGT CGCGGTCGCG CTGCGCAACC GCTGGCGCCG GCAGCAGGTC GGCGAGCCGC TGCGCCAGGA AATCACGCCG AAGAACATCC TGATGATCGG GCCGACGGGC GTCGGCAAGA CCGAAATCGC GCGCCGCCTC GCGAAGCTCG CCGATGCGCC GTTCGTCAAG ATCGAAGCGA CCAAGTTCAC CGAAGTCGGC TACGTCGGCC GCGACGTCGA CAGCATCGTG CGCGACCTGA TCGAGATCTC GGTCAAGCAG ACGCGTGAAG CCGAGATGCG CAAGGTGCGC AGCAAGGCGA CCGACCAGGC GGAAGACCGC ATCCTCGACA TCCTGCTGCC GCAACCGCGC GCGGTCGGCT TCGGCGGCAA CGCCGATCAC GCGAACGACG ACAACAACGC GACGCGCCAG ACCTTCCGCA AGCGCCTGCG CGAAGGCCAG CTCGACGACA AGGAAGTCGA GCTCGACCTC GAGCAGCCGT CGGCCGGCAT GGACATCATG GCGCCGCCGG GGATGGAAGA GATGACCGAG CAGATCCGCT CGATGTTCTC GAACCTCGGC AGCGGCAAGA AGCAGCGCCG CAAGGTCAAG ATCAAGGAAG CGCTGAAGCT GCTGACCGAC GAGGAAGCGG CGAAGATGCT CAACGACGAG GAAGTGAAGA CGAAGGCCGT GCAGAACGTC GAGCAGAACG GCATCGTGTT CCTCGACGAG ATCGACAAGA TCACGTCGCG CAACAACGAA GGCAGCGGCG GCGAAGTGTC GCGCCAGGGC GTGCAGCGCG ACCTGCTGCC GCTCGTCGAG GGCACGACCG TCAACACGAA GTACGGGATG GTGAAGACCG ATCACATCCT GTTCATCGCG AGCGGCGCGT TCCACCTCGC GAAGCCGAGC GATCTGATCC CCGAACTGCA GGGGCGCTTT CCGATCCGCG TCGAGCTCGA CTCGCTGTCG GTGGAGGATT TCGAGGCGAT CCTCGACGCG ACCGACGCGA GCCTCGTCAA GCAGTACCAG GCGCTGCTCG CCACGGAAGA CGTGCAACTC GAGTTCGCCG CGGACGGCAT CCGCCGCCTC GCCGAGATCG CGTATTCGGT CAACGAGAAG ACCGAGAACA TCGGCGCACG CCGGCTGTAC ACGGTGATCG AGAAACTGCT CGAGGAAGTG TCGTTCTCGG CCGGCAATCA CGCCGGCGAG TGCGTGACGA TCGACGCGAC GTATGTCGAC CGCGCGCTCG GCGAAGTGGC GCAGGACGAG GATCTGTCGC GCTACGTGCT CTAA
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Protein sequence | MSTMTPAEIV SELDKHIIGQ AKAKKAVAVA LRNRWRRQQV GEPLRQEITP KNILMIGPTG VGKTEIARRL AKLADAPFVK IEATKFTEVG YVGRDVDSIV RDLIEISVKQ TREAEMRKVR SKATDQAEDR ILDILLPQPR AVGFGGNADH ANDDNNATRQ TFRKRLREGQ LDDKEVELDL EQPSAGMDIM APPGMEEMTE QIRSMFSNLG SGKKQRRKVK IKEALKLLTD EEAAKMLNDE EVKTKAVQNV EQNGIVFLDE IDKITSRNNE GSGGEVSRQG VQRDLLPLVE GTTVNTKYGM VKTDHILFIA SGAFHLAKPS DLIPELQGRF PIRVELDSLS VEDFEAILDA TDASLVKQYQ ALLATEDVQL EFAADGIRRL AEIAYSVNEK TENIGARRLY TVIEKLLEEV SFSAGNHAGE CVTIDATYVD RALGEVAQDE DLSRYVL
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