Gene BamMC406_2968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2968 
Symbol 
ID6176102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3290276 
End bp3291301 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content71% 
IMG OID641682744 
Producthypothetical protein 
Protein accessionYP_001809660 
Protein GI172062008 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.594237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0976397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGTG TGGATCTCGA CGTGCTGAAG TCGAGCGCGC GCTGGCTCGA CGAAGGGCGC 
CGCGTGCTGC TCGTGACGGT CGTGAAGACG TGGGGCTCGT CGCCCCGCCC CGAAGGCGCG
ATGCTCGCCG TGCGCGAGGA CGGGCTGGTG GTCGGCTCCG TATCCGGCGG GTGCATCGAG
GACGACCTGA TCGCCCGCGT GCATGCGAGC GGCATCGCGG CCGATGCGCG CCCGGAAGCG
GTCAAGTACG GCGTGACGGC CGAGGAAGCG CACCGCTTCG GGCTGCCCTG CGGCGGCACG
ATCCAGCTCG TGCTGGAGCC GCTCACGCGC GACAGCGGGA TTGCCGCGTT GTGCGCCGAG
GTGGAAGCCG GCCGGCTCGT CACGCGCACG ATGACGCTGG CGACCGGCCG CGCGTCGCTG
TCGCCCGCGC AGGCGACAGA CGGGCTCGCG TTCGACGGCG AACGGCTCGT GACGATCCAC
GGGCCGCGCT ACCGGATGCT CGTGATCGGT GCCGGGCAGT TGTCCCGCTA TCTGTGCCAG
ATCGCGGTCG GGCTCGACTA CCAGGTGACG GTCTGCGATC CGCGCGAGGA GTACACGGAT
GCGTGGGACG TGCCGGGCAC GCGGGTCGTG CACACGATGC CCGACGACAC CGTGCTCGAC
TTGAAGCTCG ACGCGCGTTC GGCCGTGATC GCGCTCACGC ACGACCCGAA GCTCGACGAT
CTCGCGCTGA TGGAGGCGCT CAAGACGCCC GCGTTCTACG TGGGCGCGCT CGGCTCGCGG
CGCAACAACG CGGCGCGGCG CGAGCGGCTG CTCGAATTCG ACCTGAACGA CGCGGAACTG
GCGCGGCTGC ACGGGCCGGC CGGCATCTAC ATCGGCAGCC GCACGCCGCC GGAAATCGCG
ATCTCGATCC TCGCCGAGGT CACGGCCGCG AAGAACAACG TGTCGCTGCC GACGATCCTG
CAGGTCGAGG GGGCGAAGGC CGCCCGCGAG ATCGCGGCCA ACAACGGCGC GACCTGCGGC
CTGTGA
 
Protein sequence
MESVDLDVLK SSARWLDEGR RVLLVTVVKT WGSSPRPEGA MLAVREDGLV VGSVSGGCIE 
DDLIARVHAS GIAADARPEA VKYGVTAEEA HRFGLPCGGT IQLVLEPLTR DSGIAALCAE
VEAGRLVTRT MTLATGRASL SPAQATDGLA FDGERLVTIH GPRYRMLVIG AGQLSRYLCQ
IAVGLDYQVT VCDPREEYTD AWDVPGTRVV HTMPDDTVLD LKLDARSAVI ALTHDPKLDD
LALMEALKTP AFYVGALGSR RNNAARRERL LEFDLNDAEL ARLHGPAGIY IGSRTPPEIA
ISILAEVTAA KNNVSLPTIL QVEGAKAARE IAANNGATCG L