Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_2957 |
Symbol | |
ID | 6177485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 3278920 |
End bp | 3280227 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641682733 |
Product | general substrate transporter |
Protein accession | YP_001809649 |
Protein GI | 172061997 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.803782 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACGA TTGCGAATTC AACGAAAACG GCGCGGCCCG AGCGTGCGCT GAACCGGCGC GCGGTCGTGG CGGCAGTGAT CGGCAATGCG CTCGAGTGGT ACGACTTCAC GGTGTTCGGC TTCATGACGG TCGTGATCGC CGAGCTGTTC TTCCCGACTT CCAGTGAATA TTCTTCGCTG CTGCTGACCA CCGCGACGTT CGGCGTCGCA TTCTTCATGC GCCCGATCGG CGGCATCGTG TTCGGGCTCT ATGCGGACCG CGCGGGCCGC AAGGCCGCGC TGTCGCTCGT GATCCTGCTG ATGACGGCCG GCATCTTCCT GCTCGCGATC GCACCGCCCT ATGCGGCGAT CGGCATCGGC GGCCCGCTCC TGATCGTGCT CGGCCGCCTG CTGCAGGGTT TCTCGGCCGG CGGCGAATTC GGCAGCGCGA CCGCGCTGCT GATCGAAGCC GCGCCGTTCT CGAAACGCGG TTTCTACGGC AGCTGGCAGA TGGCGAGCCA GGCGGCCGCG CTGCTGATCG GCGCACTGGT CGGCGCGGCG ATCACGCGCG GGCTGTCGTA CGACGCGCTG CGCAGCTGGG GCTGGCGCGT GCCGTTCATC CTCGGGCTCG TGATCGGTCC GATCGGTTTC TATATCCGCC GTCATCTCGC CGATTCCGAA GCATTCCTGC ATGCACAGCA AAGCGCGCGC CGCGCGACGC TCGGCGAAGT GTTCACGCGC TATCCGCGCG AGGTGCTGTG CGGGCTCGGC TCGGTGATCG CGCTGACGGT CACGATCTAC GTGCTGATCA GTTATCTGCC GACCTTCGCG GTGAAGCAGC TGAAGCTGCC GTATGCGGAG TCGTTCTACG CGGTGATCAT CGGCAATCTG TTGCTGATGG TGCTGTCGCC GATCGCGGGC GCGTGGTCGG ACCGCATCGG CCGCAAGGGG CTGTCGCTGT GGTCGCTCGT GCTGACGCTC GCGCTGATGT ACCCGCTGTT CGCGTGGCTC GACGCCGCGC CGAGCATCGG GCGGCTGATC GCGGTGCAGG CCGTGCTGTC GGTGACGCTC GCGGGCTACT ACGGGCCGTT CGGCGCGATG ATCGCCGAGC TGTTCCCGGC CAACGTGCGC TCGACCGGGC TGTCGATCGC GTACAACGTC GCGGTGATGC TGTTCGGCGG GTTCGGGCAG TTCATCGTCA CGTGGCTGAT CAAGACGACG GGCACGCCAC TCGCGCCCAC CTACTACGTG ATGGCGGGGC TCGCGCTGTC GATCGTCGCC GTCGCGTTCG TGCCCGCGCG CAACGCGGAT CTCGACGCGC CGGACTGA
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Protein sequence | MATIANSTKT ARPERALNRR AVVAAVIGNA LEWYDFTVFG FMTVVIAELF FPTSSEYSSL LLTTATFGVA FFMRPIGGIV FGLYADRAGR KAALSLVILL MTAGIFLLAI APPYAAIGIG GPLLIVLGRL LQGFSAGGEF GSATALLIEA APFSKRGFYG SWQMASQAAA LLIGALVGAA ITRGLSYDAL RSWGWRVPFI LGLVIGPIGF YIRRHLADSE AFLHAQQSAR RATLGEVFTR YPREVLCGLG SVIALTVTIY VLISYLPTFA VKQLKLPYAE SFYAVIIGNL LLMVLSPIAG AWSDRIGRKG LSLWSLVLTL ALMYPLFAWL DAAPSIGRLI AVQAVLSVTL AGYYGPFGAM IAELFPANVR STGLSIAYNV AVMLFGGFGQ FIVTWLIKTT GTPLAPTYYV MAGLALSIVA VAFVPARNAD LDAPD
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