Gene BamMC406_2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_2887 
Symbol 
ID6179070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp3207702 
End bp3208892 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content71% 
IMG OID641682663 
Producthypothetical protein 
Protein accessionYP_001809579 
Protein GI172061927 
COG category[S] Function unknown 
COG ID[COG1565] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCGA AAGCTCACGA ATCCGCTAGT TTACCTGCTC CCGGCCCTGA CGCGCTCGCG 
CAGTCCGAAA TGCTCGCCGC GCAACTGCGC GACGAGATCG CGGCGGCCGG CGGCTGGCTG
CCGTTCGACC GCTTCATGGA GCGCGCGCTG TACGCGCCAG GCCTCGGCTA TTACAGCGGC
GGCGCGCGCA AGTTCGGACG CCGCGCCGAC GACGGCAGCG ACTTCGTGAC GGCCCCCGAG
CTGTCGCCGC TGTTCGCGCA GACGCTAGCG AATCCCGTCG CGGACGCGCT CGCGGCGAGC
GGCACGCGTC GCGTGATGGA GTTCGGCGCG GGCACGGGCA AGCTCGCGGC CGGGCTGCTC
GCGGCATTCG ATGCGCTCGA CGTCGAGCTC GACGAATACC TGATCGTCGA TCTGTCGGGC
GAGCTGCGCG AACGGCAGCG CGACACGATC GCGGCTTCCG CGCCGGCGCT CGCCGGCAAG
GTGCGCTGGC TCGACGCGCT GCCCGAGCGC TTCGACGGCG TCGTGGTCGG CAACGAGGTG
CTCGATGCGA TGCCGGTGCG GCTGTTCGCG AAGTCGGGCG GCGCGTGGCT CGAGCGCGGC
GTTACGCTGG ACGCGCGGCA CGCGTTCGTG TTCGGCGACC GACCCGTCGG CGCTGCCGGC
CTGCCGCCGG TGCTCGCGAC GCTCGACGTC GACGACGGCT ATGTGACCGA GACGCACGAA
GCCGCGCTCG CGTTCACGCG CACCGTGTGC ACGATGCTCG CGCGCGGCGC GGTGCTGCTG
GTCGACTACG GCTTTCCCGC GCACGAGTAC TACCATCCGC AGCGCGACCG CGGCACGCTC
ATGTGCCATT ACCGCCACCA CGCGCACGAC GACGCGTTCC TGTACCCGGG GCTGCAGGAC
ATCACCGCGC ACGTCGAATT CACCGGCATC TACGACGCGG GCGTCGGCAC CGGCGCCGAC
CTGCTCGGCT ACACGTCGCA GGCGCGCTTC CTGTTGAACG CGGGCATCAC CGACGCGCTG
GCCGCGATCG ATCCGTCCGA CATCCACCAG TTCCTGCCGG CCGCGAACGC GGTGCAGAAG
CTGATCTCGG AAGCCGAGAT GGGCGAGCTG TTCAAGGTGA TCGCCTTCTC GCGCGGGATC
GACGGCACGC TCGACGCATT CGCGCGCGGC GACCGCTCGC ACGCGCTCTG A
 
Protein sequence
MNPKAHESAS LPAPGPDALA QSEMLAAQLR DEIAAAGGWL PFDRFMERAL YAPGLGYYSG 
GARKFGRRAD DGSDFVTAPE LSPLFAQTLA NPVADALAAS GTRRVMEFGA GTGKLAAGLL
AAFDALDVEL DEYLIVDLSG ELRERQRDTI AASAPALAGK VRWLDALPER FDGVVVGNEV
LDAMPVRLFA KSGGAWLERG VTLDARHAFV FGDRPVGAAG LPPVLATLDV DDGYVTETHE
AALAFTRTVC TMLARGAVLL VDYGFPAHEY YHPQRDRGTL MCHYRHHAHD DAFLYPGLQD
ITAHVEFTGI YDAGVGTGAD LLGYTSQARF LLNAGITDAL AAIDPSDIHQ FLPAANAVQK
LISEAEMGEL FKVIAFSRGI DGTLDAFARG DRSHAL