| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2877 |
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| Symbol | |
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| ID | 6177877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3196863 |
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| End bp | 3197825 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641682653 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001809569 |
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| Protein GI | 172061917 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.645663 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACCC TCGTCAGCAT GAATGTGTTT CGCTACGTCG TCGAAGTGGG CAGCTTCGTC
GGCGCGGCGG AGCGCATGCA GATGTCGGCC GCGATGGCGA GCAAGCACGT GATGCATCTC
GAGCAGCAGC TCGGCGCGCG GCTGCTGCAT CGCACGACAC GACGCGTCGC GCCGACCGAG
GCGGGACGCG AATACTATGA GCGCCTCGTG CAGGCGCTGT CGGAACTCGA CGAAGCCGGA
CAGGCGGTCG GCGCCGCGAG CGTCGTGCCG CAGGGCCGCT TGCGCGTGAC GTCGCTGTCC
GCGTTCGGAT TGCGGCACGT GATGCAGGCC GTCACCGATT ATGCGGGCCG GTTCCCGGAC
GTGGTCGTCG ACATGACGCT GTCCGATCGC GTGGTCGACC TGATCGAGGA AGGCTATGAC
GTCGCGGTGC GCGCGGCGCC GAACGGACTG AAATCCTCGT CGCTGGTCGC GCGGCAGATC
GCGACCGCGC ACATCCTGCT GGTCGCGTCG CCCGAATATC TCGAGAAGCA CGGCACGCCG
CAGACGATCG CCGATCTCGC GCACCACAAC TACCTGCGCC GCGATTCGAA TTCGACGATG
CTCGATTCGC TGGTGATCGA CGCGGCCGCC GCGTCGCGCG TGAACCTGAA CGGCAACCTG
ATCGTGAACC ACCTCGAAGG GTTGCGCGCG GCCGTGCTCG CGGGCGCGGG CATCGCGCTG
CTCGGCACCG AGGTGGTCGG CGACGACATC GAATCCGGCC GGCTCGTGCC GGTGCTGCTC
GATTCGGTGC CCCCGCACGA GGCGCCGATC TATGCGGTGT ATGCGAGCCG CCGCCACGTG
TCCGCGAAGG TGCGCTCGTT CGTCGACTTC CTCGCCGCGC GTTTCGAAGG GCAGTCGCTG
TGCCCGTCGA TCGAATCGCA CCTGCGCGTG CTGCCGATCA CGCGGATCAA GCGCGCGGGC
TGA
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| Protein sequence | MDTLVSMNVF RYVVEVGSFV GAAERMQMSA AMASKHVMHL EQQLGARLLH RTTRRVAPTE
AGREYYERLV QALSELDEAG QAVGAASVVP QGRLRVTSLS AFGLRHVMQA VTDYAGRFPD
VVVDMTLSDR VVDLIEEGYD VAVRAAPNGL KSSSLVARQI ATAHILLVAS PEYLEKHGTP
QTIADLAHHN YLRRDSNSTM LDSLVIDAAA ASRVNLNGNL IVNHLEGLRA AVLAGAGIAL
LGTEVVGDDI ESGRLVPVLL DSVPPHEAPI YAVYASRRHV SAKVRSFVDF LAARFEGQSL
CPSIESHLRV LPITRIKRAG
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