| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2848 |
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| Symbol | |
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| ID | 6177759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 3158403 |
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| End bp | 3159689 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641682624 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001809540 |
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| Protein GI | 172061888 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.423911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.493577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCG TGCAGCAGGA GCGCCCGGCC ACCGCGTCGC CGTATCGTTT CGAGCGGGAA
ATGAGCTCCG GACTCGAACG CCTGGCGACG CGCCACCGCG ACCTGTCGCT CACGACCGTG
TTCCAGCCGA TCTTCAGCCT GTCGCACCAG CGTGCGGTGG GCTACGAGGC GCTGTTGCGC
GCGCATGACG CGCTCGACCG CGCGGTGTCG CCGCTCGACG TGTTCGGCGA GGCCGCGCGC
CAGGGAGAGC TGCTGCAGCT CGACCGGCTC GCGCAGGCGT TGCATCTCGA GAACTTCGCG
CTGCTCGGCG CCGAGCGCGA GTGGCTGTTC CTCAACGTGC ATCCGGGCGT GCTCACCGAT
CCGTTCCAGG CCGCCGCGCT GCTCGCGAAC CTGAAGCGGA TCGGCATGCC GCCGCGCCGC
GTCGTGCTCG AAGTGCTCGA ACAGCGCGCG GAAGATGTCG AGCGGCTCGC CGACGCCGTG
CGCGAGTTCC GCGCGCAGGG CTTCCTGATC GCGCTCGACG ATTTCGGCGC CGGCCACTCG
AACCTCGAGC GGATCTGGCA GCTGAACCCC GACATCGTGA AGCTCGACCG GATCATGCTG
TCCCACGCGG CGCACCGCAC GGGGCTCACC GCGATCCTGC ACGGGCTCGT CACGCTGCTG
CACGAGGCCG GCAAGCTGGT GCTCGTCGAA GGGATCGAGA CCGAGCACGA CGCGCAGATC
GCGCTGTCGT GCGAGGCCGA TTTCGTGCAG GGCTATTACT TCGGCCGCCC GGCGCCCGGG
CTGCCCGACA GCGCGGCGGC GACCGGCTGC ATCGGCGAGC TGACCGAGCG CTTTCGTGAG
CAGACCGAAG CGCGCGAGCG GCGCGACGCG CAGCGGCTCG CGCCGTACCT GCGCGCATTC
GAGCGCGCGG CCGAGCGGGT GGCGGCCGGC GAGCCGCTCG ACGAGGTGTG CTGGAACTTC
CTCGCGCTCG ACGCCGCCGC GCGCTGCTTC CTGCTCGACG CGCGGGGCCG CCAGGCGGGC
CGCAACGTCG TGCTGCGGGC GGACCGCGCG CTCGCCGAGG CGCGCTTCTC GCCGCTGTCG
GATGCGCAGG GGGCGAACTG GCTGCGCCGG CCGTACTTCC GCACGGCGAT CGCCGAGCCG
GGGCGCGTGC AGGTGACGCG TCCGTACCTG TCGATCAACG AGGCGCAGCC GTGCGTGACG
CTATCGGTGG CCGTGCGTAT CGGCGACGCG CAGCACGTGC TGTGCGGCGA TATCGATTGG
GTCGACGAGG AGGCCGGCGG CGCATAG
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| Protein sequence | MTIVQQERPA TASPYRFERE MSSGLERLAT RHRDLSLTTV FQPIFSLSHQ RAVGYEALLR
AHDALDRAVS PLDVFGEAAR QGELLQLDRL AQALHLENFA LLGAEREWLF LNVHPGVLTD
PFQAAALLAN LKRIGMPPRR VVLEVLEQRA EDVERLADAV REFRAQGFLI ALDDFGAGHS
NLERIWQLNP DIVKLDRIML SHAAHRTGLT AILHGLVTLL HEAGKLVLVE GIETEHDAQI
ALSCEADFVQ GYYFGRPAPG LPDSAAATGC IGELTERFRE QTEARERRDA QRLAPYLRAF
ERAAERVAAG EPLDEVCWNF LALDAAARCF LLDARGRQAG RNVVLRADRA LAEARFSPLS
DAQGANWLRR PYFRTAIAEP GRVQVTRPYL SINEAQPCVT LSVAVRIGDA QHVLCGDIDW
VDEEAGGA
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