| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2835 |
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| Symbol | |
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| ID | 6177638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3142296 |
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| End bp | 3143891 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641682611 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001809527 |
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| Protein GI | 172061875 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.827526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCCA AGCTGTTCGC CGCGGCCATG CTCGCCGCCG CCCTCGCCGT CCCCGGCCTC
GCCGCCGCCA AGCCGCTCAC CGTCTGCACC GAATCGAGCC CGGACGGCTT CGACGTCGTG
CAGTACAACT CGCTCGTCAC CACCAACGCA TCGGCCGACG TGATCTTCAA CACGCTCGTG
TCGTACGACG AAGCCGCGAA AAAGGTCGTG CCGGCGCTCG CCGACAAATG GGAAGCCAGC
GCCGACGGCC TCACGTACAC GTTCCACCTG CGGCCGAACG TCGCGTTCCA GACCACCGAC
TACTTCAAGC CGGGCCGCCC GCTGAGCGCG GACGACGTCG TGTTCACGTT CACGCGGATG
CTCGACGATG CAAACCCGTG GCACAAGGTG GCCGGCGCGA GCGGCTTTCC GCACGCGCAG
TCGATGGGCC TCGTGAAGCT CGTGAAGTCC GTCACGAAGG TCGACGACAA CACGGTGAAG
TTCGTGCTGA ACGAGCCGAA CGCCACGTTC GTGTCGATCC TGACGATGGG CTTCGCGTCG
ATCTACTCGG CCGAATACGC GGACCAGCTG CTGAAGGCCG GCAAGCAGGC CGACCTGAAC
GCGAAGCCGG TCGGCACCGG CCCGTTCGTG CTGAAGAGCT ACACGAAGGA CGCGCTGATC
CGCTACGACG TGAACCCGAC CTACTGGGGC GCGAAGCCGA AGGTCGACCG GCTGATCTAC
GCGATCACGC CCGACGCGTC CGTGCGCATG CAGAAGGTGA AGGCCGGCGA ATGCCAGATC
GCGCTGTCGC CGAAGCCGCA GGACGTGCTC GCCGCGAAGG GCGAAAGCGC GCTGAAGGTC
GTGCAGACGC CTGCGTTCAT GACCGCGTTC GTCGCGCTGA ACACGCAGAA GAAGCCGCTC
GACAACGAGA AGGTGCGCGA GGCGCTGAAC CTCGCATTCG ACCGCGCGAC CTACCTGAAG
GTCGTGTTCG ACAACACGGC GACGGCCGCG AACAACCCGT ATCCGCCGAA CACGTGGAGC
TACGCGAAGG ACATCGCGCC GTATGCGTAC GATCCCGCGA AGGCGAAGCA GCTGCTTGCG
TCGGCCGGTT TCCCGAACGG CTTCTCGACG ACGATCTGGA CGCGCCCGAC AGGCAGCGTG
CTGAACCCGA ACCCGAAGGC CGGCGCGGAA CTGCTGCAGG CCGACCTCGC GAAGATCGGC
GTGAAGGCCG AGGTGAAGGT GATCGAATGG GGCGAGCTGA TCAAGCAGGC GAAGCTCGGC
CAGCATGACA TGCTGTTCAT GGGCTGGGCC GGCGACAACG GCGATCCGGA CAACTACCTG
TCGCCGCTGT TCAGCTGCAA CGCGGTGAAG TCGGGCATCA ACTTCGCGCG CTTCTGCGAC
GCGCAGCTCG ACAAGCTGAT CGCCGACGGC AAATCGACCG CCGACCAGGC CAAGCGCGCG
AAGCTGTACG AATCGGCGCA GAAGGTGATC CACGACCAGG CGCTGTGGAT TCCGCTCGGC
TACCCGACCG CGGCGGCGCT CACGCGCACG AACGTGAGCG GTTATCGCGT GAGTCCGTTC
GGACGGCAGA ACTTCACGAC CGTCTCCGTG CAGTAA
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| Protein sequence | MHAKLFAAAM LAAALAVPGL AAAKPLTVCT ESSPDGFDVV QYNSLVTTNA SADVIFNTLV
SYDEAAKKVV PALADKWEAS ADGLTYTFHL RPNVAFQTTD YFKPGRPLSA DDVVFTFTRM
LDDANPWHKV AGASGFPHAQ SMGLVKLVKS VTKVDDNTVK FVLNEPNATF VSILTMGFAS
IYSAEYADQL LKAGKQADLN AKPVGTGPFV LKSYTKDALI RYDVNPTYWG AKPKVDRLIY
AITPDASVRM QKVKAGECQI ALSPKPQDVL AAKGESALKV VQTPAFMTAF VALNTQKKPL
DNEKVREALN LAFDRATYLK VVFDNTATAA NNPYPPNTWS YAKDIAPYAY DPAKAKQLLA
SAGFPNGFST TIWTRPTGSV LNPNPKAGAE LLQADLAKIG VKAEVKVIEW GELIKQAKLG
QHDMLFMGWA GDNGDPDNYL SPLFSCNAVK SGINFARFCD AQLDKLIADG KSTADQAKRA
KLYESAQKVI HDQALWIPLG YPTAAALTRT NVSGYRVSPF GRQNFTTVSV Q
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