| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_2721 |
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| Symbol | |
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| ID | 6178827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 3019759 |
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| End bp | 3020367 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641682498 |
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| Product | 50S ribosomal protein L25/general stress protein Ctc |
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| Protein accession | YP_001809414 |
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| Protein GI | 172061762 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
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| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00911774 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.21435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGTCG TCGCTTTCGA GCGCCAAGAG CAAGGTACGG GTGCGAGCCG CCGCCTGCGC
AACGCTGGTA AGACCACGGG TATCGTCTAC GGTGGCGAAG CAGCCCCGCA AAAGATCGAA
CTCGATCACA ACGCGCTGTG GCACGCACTG AAGAAGGAAG CCTTCCACTC GTCGATCCTC
GATCTCGAAG TGGCCGGCCA GTCGCAACAG GTTCTGCTGC GCGACGTGCA ATACCACCCG
TTCAAGCAAC TCGTGCTGCA CGTTGACTTC CAACGCGTCG ACGCGAAGAA GAAGCTGCAC
ACGAAGGTGC CGCTGCACTT CCTGAACGCT GAAGTCAGCC CGGCAGTGAA GCTGTCGAGC
GCAGTCGTCT CGCACGTTGC GACGGAAATC GAAATCGAGT GCCTGCCGTC GGCACTGCCG
GAATTCCTCG AAGTCGACCT GTCGAAGATC GAAGCAGGTC AGTCGCTGCA CGCGAAGGAC
ATCGCTCTGC CGAAGGGCGT GGCGCTGGTC GCGCACATCG ACGCGGAAAA CCCGGTTGTC
GCATCGGCGA CGATCCCGGC TGGCGCCGTG TCGGACGCAG CAGGCGAAGG CGAAACGCCG
GCTGCCTAA
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| Protein sequence | MKVVAFERQE QGTGASRRLR NAGKTTGIVY GGEAAPQKIE LDHNALWHAL KKEAFHSSIL
DLEVAGQSQQ VLLRDVQYHP FKQLVLHVDF QRVDAKKKLH TKVPLHFLNA EVSPAVKLSS
AVVSHVATEI EIECLPSALP EFLEVDLSKI EAGQSLHAKD IALPKGVALV AHIDAENPVV
ASATIPAGAV SDAAGEGETP AA
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